RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CAPS2Q9BXY5 557 aa23.73■■□□□ 1.39
LRFN4-202ENST00000393952 OXSMQ9NWU1 459 aa23.73■■□□□ 1.39
LRFN4-202ENST00000393952 TRNAU1APQ9NX07 287 aaKnown RBP23.73■■□□□ 1.39
LRFN4-202ENST00000393952 SIRPGQ9P1W8 387 aa23.73■■□□□ 1.39
LRFN4-202ENST00000393952 ACSL5Q9ULC5 683 aa23.73■■□□□ 1.39
LRFN4-202ENST00000393952 OARD1Q9Y530 152 aa23.73■■□□□ 1.39
LRFN4-202ENST00000393952 TDRD6O60522 2096 aaKnown RBP23.73■■□□□ 1.39
LRFN4-202ENST00000393952 NCF1BA6NI72 391 aaPredicted RBP23.72■■□□□ 1.39
LRFN4-202ENST00000393952 SYCE1LA8MT33 242 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 A8MT66 165 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 NCF1CA8MVU1 366 aaPredicted RBP23.72■■□□□ 1.39
LRFN4-202ENST00000393952 NEFHP12036 1026 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 NCF1P14598 390 aaPredicted RBP23.72■■□□□ 1.39
LRFN4-202ENST00000393952 BGNP21810 368 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 ACADLP28330 430 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 CLCNKAP51800 687 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 SP140Q13342 867 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 LRP8Q14114 963 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 TGFBIQ15582 683 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 PDK4Q16654 411 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 ZC3H10Q96K80 434 aaKnown RBP23.72■■□□□ 1.39
LRFN4-202ENST00000393952 SLC12A9Q9BXP2 914 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 ZDHHC5Q9C0B5 715 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 TMEM74BQ9NUR3 256 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 DNAJC28Q9NX36 388 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 PDE10AQ9Y233 779 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 FANCMQ8IYD8 2048 aa23.72■■□□□ 1.39
LRFN4-202ENST00000393952 SLC16A5O15375 505 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 SMIM24O75264 130 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 PSIP1O75475 530 aaKnown RBP23.71■■□□□ 1.39
LRFN4-202ENST00000393952 SLC35G4P0C7Q5 338 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 TPBGLP0DKB5 382 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 FGF3P11487 239 aaPredicted RBP23.71■■□□□ 1.39
LRFN4-202ENST00000393952 IDSP22304 550 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 GNGT1P63211 74 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 CHI3L2Q15782 390 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 PHF21BQ96EK2 531 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 MAGEB18Q96M61 343 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 FOPNLQ96NB1 174 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 PARVBQ9HBI1 364 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 NUDT4Q9NZJ9 180 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 CD274Q9NZQ7 290 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 WDR37Q9Y2I8 494 aa23.71■■□□□ 1.39
LRFN4-202ENST00000393952 A0A1B0GTW7 788 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 ARHGEF33A8MVX0 844 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 SNX2O60749 519 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 JUNDP17535 347 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 BDKRB1P46663 353 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 C21orf59P57076 290 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 ZCCHC23Q6ZST2 131 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 NRROSQ86YC3 692 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 PTGR2Q8N8N7 351 aaPredicted RBP23.7■■□□□ 1.38
LRFN4-202ENST00000393952 RDH14Q9HBH5 336 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 PRDM8Q9NQV8 689 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 NCKIPSDQ9NZQ3 722 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 PILRBQ9UKJ0 227 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 PCDHGA2Q9Y5H1 932 aa23.7■■□□□ 1.38
LRFN4-202ENST00000393952 A0A1B0GVT2 93 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 PDZK1P1A8MUH7 402 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 FFAR2O15552 330 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 GALR2O43603 387 aaPredicted RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 TRIM13O60858 407 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 IPO13O94829 963 aaKnown RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 GUCA1CO95843 209 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 GFAPP14136 432 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CYP2A7P20853 494 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 ACTR1BP42025 376 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 ACTR1AP61163 376 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 ILF3Q12906 894 aaKnown RBP eCLIP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 SIM2Q14190 667 aaPredicted RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 PFKFB4Q16877 469 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 LIPMQ5VYY2 423 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CES4AQ5XG92 561 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CAPRIN2Q6IMN6 1127 aaKnown RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 SLC30A9Q6PML9 568 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 MBOAT1Q6ZNC8 495 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 FBXO39Q8N4B4 442 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 GPBAR1Q8TDU6 330 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 PIGKQ92643 395 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 ZNF75CPQ92670 426 aaPredicted RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 ACSS2Q9NR19 701 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 TBC1D29Q9UFV1 150 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 APOBEC3BQ9UH17 382 aaKnown RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 KRT87PA6NCN2 255 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 KLK8O60259 260 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CATP04040 527 aaKnown RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CSF2P04141 144 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 CELA2BP08218 269 aaPredicted RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 ENO2P09104 434 aaPredicted RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 GNSP15586 552 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 MAPK9P45984 424 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 RPIAP49247 311 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 BLKP51451 505 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 PRKAA2P54646 552 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 NFKB2Q00653 900 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 TEAD4Q15561 434 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.69■■□□□ 1.38
LRFN4-202ENST00000393952 PPP1R14CQ8TAE6 165 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 LRRC8CQ8TDW0 803 aa23.69■■□□□ 1.38
LRFN4-202ENST00000393952 SKA1Q96BD8 255 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms