RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 AIG1Q9NVV5 245 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 TMEM45AQ9NWC5 275 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 TRPS1Q9UHF7 1281 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 C15orf41Q9Y2V0 281 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 MRASO14807 208 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 EPHX1P07099 455 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 GDF5P43026 501 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 PTDSS1P48651 473 aaKnown RBP24.67■■□□□ 1.54
SHOX2-201ENST00000389589 TCHHL1Q5QJ38 904 aaPredicted RBP24.67■■□□□ 1.54
SHOX2-201ENST00000389589 IL27RAQ6UWB1 636 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 LRRC70Q7Z2Q7 622 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 PCYOX1LQ8NBM8 494 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 OR2T11Q8NH01 316 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 TSPEARQ8WU66 669 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 ANKRD27Q96NW4 1050 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 CCM2Q9BSQ5 444 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 ZCCHC2Q9C0B9 1178 aaKnown RBP24.67■■□□□ 1.54
SHOX2-201ENST00000389589 PRSS16Q9NQE7 514 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 BCAP29Q9UHQ4 241 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 NDUFAF1Q9Y375 327 aa24.67■■□□□ 1.54
SHOX2-201ENST00000389589 TBX10O75333 385 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 RECQL5O94762 991 aaPredicted RBP24.66■■□□□ 1.54
SHOX2-201ENST00000389589 WDR47O94967 919 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 APODP05090 189 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 LAMP2P13473 410 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 PSME3P61289 254 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 ADAM15Q13444 863 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 ZNF423Q2M1K9 1284 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 ITPRIPL2Q3MIP1 535 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 ZNF648Q5T619 568 aaPredicted RBP24.66■■□□□ 1.54
SHOX2-201ENST00000389589 FAM46CQ5VWP2 391 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 SCIMPQ6UWF3 145 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 MBOAT1Q6ZNC8 495 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 NLRP8Q86W28 1048 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 MMAAQ8IVH4 418 aaKnown RBP24.66■■□□□ 1.54
SHOX2-201ENST00000389589 BEND7Q8N7W2 519 aaPredicted RBP24.66■■□□□ 1.54
SHOX2-201ENST00000389589 ROPN1LQ96C74 230 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 BRINP2Q9C0B6 783 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 ZFC3H1O60293 1989 aaKnown RBP24.66■■□□□ 1.54
SHOX2-201ENST00000389589 SORBS2O94875 1100 aaKnown RBP24.66■■□□□ 1.54
SHOX2-201ENST00000389589 C6P13671 934 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 GDI1P31150 447 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 MAPK9P45984 424 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 DPTQ07507 201 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 CCNIQ14094 377 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 SYTL3Q4VX76 610 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 C6orf136Q5SQH8 315 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 Q6ZSR9 355 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 RASGRP3Q8IV61 690 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 EFCAB3Q8N7B9 438 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 GLMNQ92990 594 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 COQ6Q9Y2Z9 468 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 LAMA3Q16787 3333 aa24.66■■□□□ 1.54
SHOX2-201ENST00000389589 LZTS3O60299 673 aaPredicted RBP24.65■■□□□ 1.54
SHOX2-201ENST00000389589 ME2P23368 584 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 PSMD8P48556 350 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 PDCD4Q53EL6 469 aaKnown RBP24.65■■□□□ 1.54
SHOX2-201ENST00000389589 SNX31Q8N9S9 440 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 TMEM159Q96B96 161 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 PCDHGA7Q9Y5G6 932 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 INPP4BO15327 924 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 TSPAN6O43657 245 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 GSTM1P09488 218 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 THOP1P52888 689 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 CTSCP53634 463 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 DIO3P55073 304 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 GSTM4Q03013 218 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 SWT1Q5T5J6 900 aaKnown RBP24.65■■□□□ 1.54
SHOX2-201ENST00000389589 PARM1Q6UWI2 310 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 RIPOR3Q96MK2 946 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 TRMT61BQ9BVS5 477 aaKnown RBP24.65■■□□□ 1.54
SHOX2-201ENST00000389589 SLC29A3Q9BZD2 475 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 S1PR5Q9H228 398 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 S100A14Q9HCY8 104 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 HCN2Q9UL51 889 aa24.65■■□□□ 1.54
SHOX2-201ENST00000389589 CNOT6Q9ULM6 557 aaKnown RBP24.65■■□□□ 1.54
SHOX2-201ENST00000389589 NR5A2O00482 541 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 SYNCRIPO60506 623 aaKnown RBP24.64■■□□□ 1.53
SHOX2-201ENST00000389589 DPP6P42658 865 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 HTR6P50406 440 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 COQ5Q5HYK3 327 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 EGFLAMQ63HQ2 1017 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 TMEM220Q6QAJ8 160 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 FNDC5Q8NAU1 212 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 KCNV2Q8TDN2 545 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 CXorf40AQ8TE69 158 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 CHFRQ96EP1 664 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 TACO1Q9BSH4 297 aaKnown RBP24.64■■□□□ 1.53
SHOX2-201ENST00000389589 CROTQ9UKG9 612 aa24.64■■□□□ 1.53
SHOX2-201ENST00000389589 MMP20O60882 483 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 SOD1P00441 154 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 GPR1P46091 355 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 SLC6A12P48065 614 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 NME5P56597 212 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 EMX2Q04743 252 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 CEACAM7Q14002 265 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 BLOC1S3Q6QNY0 202 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 SFRP1Q8N474 314 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 FGF14Q92915 247 aa24.63■■□□□ 1.53
SHOX2-201ENST00000389589 PPP3R2Q96LZ3 170 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms