RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
NEK4-202ENST00000383721 TNPO3Q9Y5L0 923 aaKnown RBP13.61□□□□□ -0.23
NEK4-202ENST00000383721 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
NEK4-202ENST00000383721 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 EPOPA6NHQ4 379 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 PRMT5O14744 637 aaPredicted RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 FFAR2O15552 330 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 TULP3O75386 442 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ALBP02768 609 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ANXA6P08133 673 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 PCNAP12004 261 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 GGT1P19440 569 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 JAK1P23458 1154 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 POLR2IP36954 125 aaKnown RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 HLCSP50747 726 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 CACNG1Q06432 222 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 TWF1Q12792 350 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 MYBPC3Q14896 1274 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 HECTD3Q5T447 861 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 TMEM26Q6ZUK4 368 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 STK40Q8N2I9 435 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 LEMD2Q8NC56 503 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 PDPRQ8NCN5 879 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ZNF420Q8TAQ5 688 aaPredicted RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 GFM2Q969S9 779 aaKnown RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 TMBIM1Q969X1 311 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 YTHDF1Q9BYJ9 559 aaKnown RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 NAA50Q9GZZ1 169 aaKnown RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 CARS2Q9HA77 564 aaKnown RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 ELOVL2Q9NXB9 296 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 VAPAQ9P0L0 249 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 IFT80Q9P2H3 777 aaPredicted RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 LHX3Q9UBR4 397 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ZMYM5Q9UJ78 669 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 PCDHB9Q9Y5E1 797 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 TAPBPO15533 448 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 B4GAT1O43505 415 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 FZD6O60353 706 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 DFNA5O60443 496 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 RAP2AP10114 183 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 CTPS1P17812 591 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 TTKP33981 857 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 SHMT2P34897 504 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 HSPA7P48741 367 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ALDH3A2P51648 485 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 DAG1Q14118 895 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ITIH5Q86UX2 942 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 FAM86B1Q8N7N1 296 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 C2orf15Q8WU43 125 aaKnown RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 PLD4Q96BZ4 506 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
NEK4-202ENST00000383721 PKP3Q9Y446 797 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 ZNF711Q9Y462 761 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 SLC30A1Q9Y6M5 507 aa13.6□□□□□ -0.23
NEK4-202ENST00000383721 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 H7C4K7 107 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 FOXD2O60548 495 aaPredicted RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 DEAF1O75398 565 aaPredicted RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 GUCA1CO95843 209 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 OTCP00480 354 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 ALPLP05186 524 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 ALPIP09923 528 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 IRF1P10914 325 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 ITGB6P18564 788 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 RPL17P18621 184 aaKnown RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 ELK4P28324 431 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 PTGR1Q14914 329 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 NEDD8Q15843 81 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 ELMSAN1Q6PJG2 1045 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 ANKS3Q6ZW76 656 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 MILR1Q7Z6M3 343 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 OR8J3Q8NGG0 315 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 LKAAEAR1Q8TD35 194 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 TTPALQ9BTX7 342 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 BOCQ9BWV1 1114 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 CIPCQ9C0C6 399 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 RNF38Q9H0F5 515 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 SLC28A3Q9HAS3 691 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 SMPD4Q9NXE4 827 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 PCDHB1Q9Y5F3 818 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 MYO7AQ13402 2215 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 A0A1W2PPW3 197 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 RFXAPO00287 272 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 IFRD1O00458 451 aaPredicted RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 GRM6O15303 877 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 PFDN1O60925 122 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 BMP1P13497 986 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 SLC2A4P14672 509 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 NFKBIAP25963 317 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 HMOX2P30519 316 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 HMGCLP35914 325 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 ERVK-21P61565 698 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 RPL38P63173 70 aaKnown RBP13.59□□□□□ -0.23
NEK4-202ENST00000383721 RAB30Q15771 203 aa13.59□□□□□ -0.23
NEK4-202ENST00000383721 FAM98BQ52LJ0 330 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms