RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 TBC1D23Q9NUY8 699 aa16.02■□□□□ 0.16
VPS16-203ENST00000380469 MAGED1Q9Y5V3 778 aaPredicted RBP16.02■□□□□ 0.16
VPS16-203ENST00000380469 ELOVL7A1L3X0 281 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 SCELO95171 688 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 SLC25A14O95258 325 aaPredicted RBP16.02■□□□□ 0.15
VPS16-203ENST00000380469 PRAMEF12O95522 483 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 GALTP07902 379 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 ALPIP09923 528 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 MAP4P27816 1152 aaKnown RBP16.02■□□□□ 0.15
VPS16-203ENST00000380469 POLR2IP36954 125 aaKnown RBP16.02■□□□□ 0.15
VPS16-203ENST00000380469 TUBA3CQ13748 450 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 TAF12Q16514 161 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 ATXN7L2Q5T6C5 722 aaPredicted RBP16.02■□□□□ 0.15
VPS16-203ENST00000380469 ELMSAN1Q6PJG2 1045 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 ENPP6Q6UWR7 440 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 SAPCD2Q86UD0 394 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 SVOPLQ8N434 492 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 LIX1Q8N485 282 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 PAF1Q8N7H5 531 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 BORCS5Q969J3 196 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 EID2BQ96D98 161 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 MYO19Q96H55 970 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 KLQ9UEF7 1012 aa16.02■□□□□ 0.15
VPS16-203ENST00000380469 FCF1Q9Y324 198 aaKnown RBP16.02■□□□□ 0.15
VPS16-203ENST00000380469 TMX2-CTNND1H3BSU7 103 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ADAM12O43184 909 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 B4GAT1O43505 415 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 TBL1XO60907 577 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ABCB7O75027 752 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 SEC22BO75396 215 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 WDR47O94967 919 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 CCNA2P20248 432 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 MZF1P28698 734 aaPredicted RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 PIK3CGP48736 1102 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 CBX2Q14781 532 aaPredicted RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 ZNF829Q3KNS6 432 aaPredicted RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 PLA2G4EQ3MJ16 856 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 SGO1Q5FBB7 561 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 SNX20Q7Z614 316 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 SLC22A17Q8WUG5 538 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ACTR8Q9H981 624 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 FAM118AQ9NWS6 357 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ZNF490Q9ULM2 529 aaPredicted RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 INVSQ9Y283 1065 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 NEUROG3Q9Y4Z2 214 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 TRIM64BA6NI03 449 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 TMEM88BA6NKF7 163 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 CXCR6O00574 342 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 FOXD2O60548 495 aaPredicted RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 PGLSO95336 258 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 PGRP06401 933 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ITGALP20701 1170 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 MATN1P21941 496 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 OR1D2P34982 312 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 GDF5P43026 501 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 SKIV2LQ15477 1246 aaKnown RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 LRRC8DQ7L1W4 858 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ZBTB2Q8N680 514 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 FAM86B1Q8N7N1 296 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 TBC1D15Q8TC07 691 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 HDAC2Q92769 488 aaKnown RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 ULK4Q96C45 1275 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 RBM4BQ9BQ04 359 aaKnown RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 TMEM175Q9BSA9 504 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 FEM1AQ9BSK4 669 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 RBM4Q9BWF3 364 aaKnown RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 BOCQ9BWV1 1114 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 CARS2Q9HA77 564 aaKnown RBP16.01■□□□□ 0.15
VPS16-203ENST00000380469 SMURF2Q9HAU4 748 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ZFYVE1Q9HBF4 777 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 LRTM1Q9HBL6 345 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
VPS16-203ENST00000380469 K7EPI3 171 aa16■□□□□ 0.15
VPS16-203ENST00000380469 MAGEB3O15480 346 aa16■□□□□ 0.15
VPS16-203ENST00000380469 SEC14L2O76054 403 aa16■□□□□ 0.15
VPS16-203ENST00000380469 AP1S1P61966 158 aa16■□□□□ 0.15
VPS16-203ENST00000380469 HMGCS1Q01581 520 aa16■□□□□ 0.15
VPS16-203ENST00000380469 SPANXN4Q5MJ08 99 aa16■□□□□ 0.15
VPS16-203ENST00000380469 LYPLAL1Q5VWZ2 237 aa16■□□□□ 0.15
VPS16-203ENST00000380469 RNF165Q6ZSG1 346 aa16■□□□□ 0.15
VPS16-203ENST00000380469 TRIM46Q7Z4K8 759 aa16■□□□□ 0.15
VPS16-203ENST00000380469 R3HCC1LQ7Z5L2 792 aaKnown RBP16■□□□□ 0.15
VPS16-203ENST00000380469 TMEM173Q86WV6 379 aaPredicted RBP16■□□□□ 0.15
VPS16-203ENST00000380469 HOMEZQ8IX15 550 aa16■□□□□ 0.15
VPS16-203ENST00000380469 CCDC97Q96F63 343 aaPredicted RBP16■□□□□ 0.15
VPS16-203ENST00000380469 MAGED4Q96JG8 741 aa16■□□□□ 0.15
VPS16-203ENST00000380469 OR52E6Q96RD3 313 aa16■□□□□ 0.15
VPS16-203ENST00000380469 TBCDQ9BTW9 1192 aa16■□□□□ 0.15
VPS16-203ENST00000380469 OSBPL10Q9BXB5 764 aa16■□□□□ 0.15
VPS16-203ENST00000380469 KLF16Q9BXK1 252 aaPredicted RBP16■□□□□ 0.15
VPS16-203ENST00000380469 RNF38Q9H0F5 515 aa16■□□□□ 0.15
VPS16-203ENST00000380469 FARSBQ9NSD9 589 aaKnown RBP16■□□□□ 0.15
VPS16-203ENST00000380469 DNAAF2Q9NVR5 837 aaKnown RBP16■□□□□ 0.15
VPS16-203ENST00000380469 TRPS1Q9UHF7 1281 aa16■□□□□ 0.15
VPS16-203ENST00000380469 BLOC1S6Q9UL45 172 aa16■□□□□ 0.15
VPS16-203ENST00000380469 EBLN1P0CF75 366 aa16■□□□□ 0.15
VPS16-203ENST00000380469 EPB42P16452 691 aa16■□□□□ 0.15
VPS16-203ENST00000380469 HMGA1P17096 107 aaKnown RBP16■□□□□ 0.15
VPS16-203ENST00000380469 RPL17P18621 184 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms