RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RORAP35398 523 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 PRLHRP49683 370 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 RRADP55042 308 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 ATP1A4Q13733 1029 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 PRPSAP1Q14558 356 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 ZNF449Q6P9G9 518 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 FAM198BQ6UWH4 519 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 MED25Q71SY5 747 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 RAB43Q86YS6 212 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 RCOR2Q8IZ40 523 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 SGSM3Q96HU1 749 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 COPS8Q99627 209 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 SYTL2Q9HCH5 934 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 INTUQ9ULD6 942 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 E7EQ34 232 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 CEACAM4O75871 244 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 PVRP15151 417 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 AGXTP21549 392 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 MARCKSL1P49006 195 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 NCF4Q15080 339 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 SLC6A19Q695T7 634 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 KATNAL2Q8IYT4 538 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 ZBTB2Q8N680 514 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 TMEM102Q8N9M5 508 aaPredicted RBP22.42■■□□□ 1.18
U2AF1-202ENST00000380276 PHC3Q8NDX5 983 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 NRTNQ99748 197 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 HGH1Q9BTY7 390 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 XKR8Q9H6D3 395 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 COG4Q9H9E3 785 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 PADI2Q9Y2J8 665 aa22.42■■□□□ 1.18
U2AF1-202ENST00000380276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.42■■□□□ 1.18
U2AF1-202ENST00000380276 USP9YO00507 2555 aaPredicted RBP22.41■■□□□ 1.18
U2AF1-202ENST00000380276 TCP11X1B4DZS4 312 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 BTN3A3O00478 584 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 CCL22O00626 93 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 SGTAO43765 313 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 RNF224P0DH78 156 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 ATP1B2P14415 290 aaPredicted RBP22.41■■□□□ 1.18
U2AF1-202ENST00000380276 PSMB4P28070 264 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 XIAPP98170 497 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 PRKG2Q13237 762 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 MLIPQ5VWP3 458 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 NXPE1Q8N323 547 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 OR52E1Q8NGJ3 308 aa22.41■■□□□ 1.18
U2AF1-202ENST00000380276 AAR2Q9Y312 384 aaKnown RBP22.41■■□□□ 1.18
U2AF1-202ENST00000380276 C2orf74A8MZ97 194 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 ZNF749O43361 778 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 CTNNA2P26232 953 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 ZRANB3Q5FWF4 1079 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 ZNF789Q5FWF6 425 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 SARM1Q6SZW1 724 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 AMIGO1Q86WK6 493 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 HPS6Q86YV9 775 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 VSTM4Q8IW00 320 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 GPR135Q8IZ08 494 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 RBMXL3Q8N7X1 1067 aaKnown RBP22.4■■□□□ 1.18
U2AF1-202ENST00000380276 Q8NA96 180 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 HEXDCQ8WVB3 486 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 PNPLA2Q96AD5 504 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 TRAPPC9Q96Q05 1148 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 GORASP1Q9BQQ3 440 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 VPS37BQ9H9H4 285 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 CUEDC1Q9NWM3 386 aaPredicted RBP22.4■■□□□ 1.18
U2AF1-202ENST00000380276 GPN3Q9UHW5 284 aaPredicted RBP22.4■■□□□ 1.18
U2AF1-202ENST00000380276 MED13Q9UHV7 2174 aa22.4■■□□□ 1.18
U2AF1-202ENST00000380276 APOC4-APOC2K7ER74 178 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 LDB2O43679 373 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 STK10O94804 968 aaKnown RBP22.39■■□□□ 1.17
U2AF1-202ENST00000380276 APOC2P02655 101 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 CAPN1P07384 714 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 HBQ1P09105 142 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 VARSP26640 1264 aaKnown RBP22.39■■□□□ 1.17
U2AF1-202ENST00000380276 MC4RP32245 332 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 HADHAP40939 763 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 MAGEA1P43355 309 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 TCEAL1Q15170 157 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 C1orf189Q5VU69 101 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 BBS12Q6ZW61 710 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 TAS2R42Q7RTR8 314 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 SNX20Q7Z614 316 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 CDKL3Q8IVW4 592 aaPredicted RBP22.39■■□□□ 1.17
U2AF1-202ENST00000380276 GLIS1Q8NBF1 620 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 IRAK4Q9NWZ3 460 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 ACTR10Q9NZ32 417 aa22.39■■□□□ 1.17
U2AF1-202ENST00000380276 USP9XQ93008 2570 aaPredicted RBP22.38■■□□□ 1.17
U2AF1-202ENST00000380276 UTP20O75691 2785 aaKnown RBP22.38■■□□□ 1.17
U2AF1-202ENST00000380276 C17orf113A0A1B0GUU1 675 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 KCNN4O15554 427 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 KRT86O43790 486 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 PDHA2P29803 388 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 ANKRD20A2Q5SQ80 823 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 ANKRD20A1Q5TYW2 823 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 ANKRD20A3Q5VUR7 823 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 RANBP10Q6VN20 620 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 CDHR3Q6ZTQ4 885 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 TRIM73Q86UV7 250 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 KRT35Q92764 455 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 LRRC45Q96CN5 670 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 FAM118BQ9BPY3 351 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 TBL1YQ9BQ87 522 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms