RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TRPV3Q8NET8 790 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 OR4D10Q8NGI6 311 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 OR52N1Q8NH53 320 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 MS4A4AQ96JQ5 239 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 DCLRE1CQ96SD1 692 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SH2D3AQ9BRG2 576 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 NXF2Q9GZY0 626 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ESRP2Q9H6T0 727 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CYP4F12Q9HCS2 524 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 INTS10Q9NVR2 710 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF358Q9NW07 568 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 MKLN1Q9UL63 735 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RAB23Q9ULC3 237 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PCDHGB2Q9Y5G2 931 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 FAM159BA6NKW6 160 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 DSCR3O14972 297 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GATCO43716 136 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 UGT2B17O75795 530 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SOAT2O75908 522 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 LGALS2P05162 132 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GPC1P35052 558 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 HNF4AP41235 474 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RECQLP46063 649 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 UGT2B15P54855 530 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 DYNLT1P63172 113 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CD47Q08722 323 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 DPYSL3Q14195 570 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PTPRRQ15256 657 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 C21orf62-AS1Q17RA5 79 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PTCHD3Q3KNS1 767 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 OTUD3Q5T2D3 398 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SEL1L3Q68CR1 1132 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TXNRD3NBQ6F5E7 133 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 LAYNQ6UX15 382 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TRIM48Q8IWZ4 208 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 BLOC1S5Q8TDH9 187 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF516Q92618 1163 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.36□□□□□ -1.233e-8■■■■■ 70.6
CDKL5-201ENST00000379989 TMEM143Q96AN5 459 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 C18orf25Q96B23 403 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SCYL1Q96KG9 808 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 LINC00052Q96N35 136 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 NPAS1Q99742 590 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 APOL4Q9BPW4 351 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 KATNBL1Q9H079 304 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 GBA2Q9HCG7 927 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ACSS2Q9NR19 701 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 KLHL21Q9UJP4 597 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ANK1P16157 1881 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SLC12A8A0AV02 714 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TNFRSF21O75509 655 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 AHSGP02765 367 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RPS17P08708 135 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RRASP10301 218 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CSKP41240 450 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CDKN2BP42772 138 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SERPINB9P50453 376 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF169Q14929 603 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 KIF19Q2TAC6 998 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 HKDC1Q2TB90 917 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 PYCR3Q53H96 274 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TFDP3Q5H9I0 405 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SYT6Q5T7P8 510 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SPRYD7Q5W111 196 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TAF2Q6P1X5 1199 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 C8orf82Q6P1X6 216 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RBM23Q86U06 439 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TNS4Q8IZW8 715 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RNF149Q8NC42 400 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 FEZF2Q8TBJ5 459 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SETD6Q8TBK2 473 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 UBASH3BQ8TF42 649 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 RBPMSQ93062 196 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CNPY3Q9BT09 278 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 CINPQ9BW66 212 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 KAT8Q9H7Z6 458 aaKnown RBP7.36□□□□□ -1.23
CDKL5-201ENST00000379989 EGFL7Q9UHF1 273 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 SPATA2Q9UM82 520 aa7.36□□□□□ -1.23
CDKL5-201ENST00000379989 TTC24A2A3L6 582 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 PMPCBO75439 489 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 MT-ND1P03886 318 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 FABP1P07148 127 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 SFTPCP11686 197 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 FCGR1AP12314 374 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 PSMB9P28065 219 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 POU1F1P28069 291 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TYK2P29597 1187 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 HLA-FP30511 346 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 BMP8BP34820 402 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 TGFBR2P37173 567 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CCT3P49368 545 aaKnown RBP7.35□□□□□ -1.23
CDKL5-201ENST00000379989 RBP5P82980 135 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF91Q05481 1191 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CDH17Q12864 832 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 DGKZQ13574 1117 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 CLCA4Q14CN2 919 aa7.35□□□□□ -1.23
CDKL5-201ENST00000379989 ZMAT1Q5H9K5 638 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms