RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PNPT1Q8TCS8 783 aaKnown RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 C12orf66Q96MD2 445 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 PRICKLE1Q96MT3 831 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 CCM2Q9BSQ5 444 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF334Q9HCZ1 680 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 FBXL12Q9NXK8 326 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 SRCP12931 536 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 C2orf80Q0P641 193 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 TRIM25Q14258 630 aaKnown RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 TRIM71Q2Q1W2 868 aaKnown RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 TRIM74Q86UV6 250 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 PHC3Q8NDX5 983 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 OR9I1Q8NGQ6 314 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ROPN1LQ96C74 230 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 A0A0U1RQS6 177 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 CYP7B1O75881 506 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ETV4P43268 484 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 HNMTP50135 292 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ITPRIPL2Q3MIP1 535 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ZIK1Q3SY52 487 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF534Q76KX8 674 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 KRT73Q86Y46 540 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ALG2Q9H553 416 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 FBRSL1Q9HCM7 1045 aaKnown RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ADGRE2Q9UHX3 823 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 VIPP01282 170 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 HPGDP15428 266 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 GJA8P48165 433 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 TRIM40Q6P9F5 258 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 CYP4V2Q6ZWL3 525 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 MICU2Q8IYU8 434 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 KXD1Q9BQD3 176 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 RIBC2Q9H4K1 309 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 EXOSC4Q9NPD3 245 aaKnown RBP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 KRT75O95678 551 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CBSLP0DN79 551 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 ATP6V1C1P21283 382 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CBSP35520 551 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CLK1P49759 484 aaKnown RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 SEMA3AQ14563 771 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 ANKRD33Q7Z3H0 272 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 GPR141Q7Z602 305 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 OR2T34Q8NGX1 318 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 OR2T3Q8NH03 318 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 OLIG1Q8TAK6 271 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 ARRDC2Q8TBH0 407 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 TCEAL4Q96EI5 215 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 SLC22A12Q96S37 553 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 ZDHHC4Q9NPG8 344 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 HSFX1Q9UBD0 423 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 GIMAP2Q9UG22 337 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 PRKAG3Q9UGI9 489 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CAPN8A6NHC0 703 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 STX16-NPEPL1H3BU86 382 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 STX16O14662 325 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 TULP3O75386 442 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 PTPN5P54829 565 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 RGS1Q08116 209 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 TSPAN33Q86UF1 283 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 TREML1Q86YW5 311 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 RERGQ96A58 199 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 SH3GL3Q99963 347 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CRISPLD1Q9H336 500 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 SOHLH2Q9NX45 425 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 F5P12259 2224 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CST1P01037 141 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 PPIBP23284 216 aaKnown RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 RGRP47804 291 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 RSPO2Q6UXX9 243 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 GOLGA7Q7Z5G4 137 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 PROSER1Q86XN7 944 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 RHEBL1Q8TAI7 183 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 LRIG1Q96JA1 1093 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 ARNT2Q9HBZ2 717 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CORO2BQ9UQ03 480 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 MYRFQ9Y2G1 1151 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 COQ6Q9Y2Z9 468 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 URADA6NGE7 173 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 FAM220BPB1ANY3 271 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 KLKB1P03952 638 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 PREPP48147 710 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 TMEM115Q12893 351 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 PHKG1Q16816 387 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 HID1Q8IV36 788 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 CHST14Q8NCH0 376 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 SLC13A3Q8WWT9 602 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 NSUN5Q96P11 429 aaKnown RBP14.23□□□□□ -0.13
TCOF1-202ENST00000377797 ITM2CQ9NQX7 267 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 WASF2Q9Y6W5 498 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 COLEC10Q9Y6Z7 277 aa14.23□□□□□ -0.13
TCOF1-202ENST00000377797 EFNA1P20827 205 aaPredicted RBP14.22□□□□□ -0.13
TCOF1-202ENST00000377797 AQP1P29972 269 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 OR4A15Q8NGL6 344 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 LCN9Q8WX39 176 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 MIPEPQ99797 713 aa14.22□□□□□ -0.13
TCOF1-202ENST00000377797 PPM1HQ9ULR3 514 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms