RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 MTFMTQ96DP5 389 aaKnown RBP12.33□□□□□ -0.44
CLCN6-206ENST00000376496 CMTM5Q96DZ9 223 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 HDAC8Q9BY41 377 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 KCNK12Q9HB15 430 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 TM7SF3Q9NS93 570 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
CLCN6-206ENST00000376496 EPS15L1Q9UBC2 864 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 OPTCQ9UBM4 332 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 RNF11Q9Y3C5 154 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 OR1A2Q9Y585 309 aa12.33□□□□□ -0.44
CLCN6-206ENST00000376496 H0Y3Z8 333 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 HNRNPCL1O60812 293 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ATG13O75143 517 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 MLYCDO95822 493 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 FTH1P02794 183 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 RPS14P62263 151 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 FGL2Q14314 439 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 WSCD2Q2TBF2 565 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 FAM46CQ5VWP2 391 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ZNF547Q8IVP9 402 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CPSF7Q8N684 471 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 PPFIBP2Q8ND30 876 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ASZ1Q8WWH4 475 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ASB2Q96Q27 587 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 NRTNQ99748 197 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 FZD3Q9NPG1 666 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ARHGEF33A8MVX0 844 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 LOC730098B7Z3J9 87 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 SNUPNO95149 360 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CBSLP0DN79 551 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CBSP35520 551 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 MSX2P35548 267 aaPredicted RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 PRLHRP49683 370 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CCNG1P51959 295 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ENPP2Q13822 863 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 FASTKQ14296 549 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 KIF19Q2TAC6 998 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 SULT1C3Q6IMI6 304 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 IL27RAQ6UWB1 636 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 RIPOR1Q6ZS17 1223 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CHSY3Q70JA7 882 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CYP2U1Q7Z449 544 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 MILR1Q7Z6M3 343 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 TMEM159Q96B96 161 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CCDC124Q96CT7 223 aaKnown RBP12.32□□□□□ -0.44
CLCN6-206ENST00000376496 ZNF382Q96SR6 550 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 CCM2Q9BSQ5 444 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 PRO3102Q9H379 93 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 PARVBQ9HBI1 364 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 FBXL12Q9NXK8 326 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 L3MBTL1Q9Y468 752 aa12.32□□□□□ -0.44
CLCN6-206ENST00000376496 SOX1O00570 391 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 CFLARO15519 480 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 ANXA5P08758 320 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 UROSP10746 265 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 ENO3P13929 434 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 HOXB2P14652 356 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 EPORP19235 508 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 CYLC2Q14093 348 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 NFE2L1Q14494 772 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 ABRAXAS2Q15018 415 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 TCEA2Q15560 299 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 PTCHD3Q3KNS1 767 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 LAYNQ6UX15 382 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 ULK2Q8IYT8 1036 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 RNF148Q8N7C7 305 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 OR14C36Q8NHC7 312 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SLC12A9Q9BXP2 914 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 ZFR2Q9UPR6 939 aaKnown RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 A0A088AWK7 358 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 A0A1W2PQF6 199 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 PSMD12O00232 456 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 RNASEH1O60930 286 aaKnown RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 STK16O75716 305 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 TM7SF2O76062 418 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 AP2A2O94973 939 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 NTSR1P30989 418 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 TFF2Q03403 129 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 NEK5Q6P3R8 708 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 FLCNQ8NFG4 579 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 LRCH3Q96II8 777 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SLC22A14Q9Y267 594 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 TNPO3Q9Y5L0 923 aaKnown RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 K7EPI3 171 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 LILRB5O75023 590 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SLCO2B1O94956 709 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 WDR47O94967 919 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 HIST1H2AGP0C0S8 130 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 HIST1H2ADP20671 130 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms