RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 ZNF225Q9UK10 706 aa10.88□□□□□ -0.67
PDPN-202ENST00000376057 PRR19A6NJB7 356 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 NPIPB8E9PQR5 432 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 RNGTTO60942 597 aaKnown RBP10.87□□□□□ -0.67
PDPN-202ENST00000376057 MTX2O75431 263 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 STK16O75716 305 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 PCDH8O95206 1070 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 ZNF8P17098 575 aaPredicted RBP10.87□□□□□ -0.67
PDPN-202ENST00000376057 NUDT1P36639 197 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 ARHGAP8P85298 464 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 SGCGQ13326 291 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 E2F2Q14209 437 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 FGL2Q14314 439 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 SYTL3Q4VX76 610 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 ZNF852Q6ZMS4 543 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 PLA2G15Q8NCC3 412 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 EXT2Q93063 718 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 C19orf60Q96EN9 201 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 OR2AG1Q9H205 316 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 KLC4Q9NSK0 619 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 OPTCQ9UBM4 332 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 EIF2B4Q9UI10 523 aaKnown RBP10.87□□□□□ -0.67
PDPN-202ENST00000376057 SLC17A4Q9Y2C5 497 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 LRRC14BA6NHZ5 514 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 OR2AG2A6NM03 316 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 MYO1CO00159 1063 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 KMOO15229 486 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 INPP4BO15327 924 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 CHEK2O96017 543 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 ACADLP28330 430 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 MAGEA9P43362 315 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 KIAA1024LP59773 190 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 LRRC32Q14392 662 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 IRF4Q15306 451 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 SYT13Q7L8C5 426 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 TREML1Q86YW5 311 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 RPLP0P6Q8NHW5 317 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 FOPNLQ96NB1 174 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 RAB3IPQ96QF0 476 aaPredicted RBP10.87□□□□□ -0.67
PDPN-202ENST00000376057 TIMM29Q9BSF4 260 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 BTBD10Q9BSF8 475 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 PHPT1Q9NRX4 125 aaPredicted RBP10.87□□□□□ -0.67
PDPN-202ENST00000376057 WNT16Q9UBV4 365 aa10.87□□□□□ -0.67
PDPN-202ENST00000376057 NARSO43776 548 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 CATP04040 527 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 CHRNB1P11230 501 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 NQO1P15559 274 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 ACADVLP49748 655 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 DGKEP52429 567 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 CDH13P55290 713 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 STARD6P59095 220 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 TRAF3Q13114 568 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 BOP1Q14137 746 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 ZNF648Q5T619 568 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 SPATA19Q7Z5L4 167 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 LRRTM4Q86VH4 590 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 HEATR4Q86WZ0 1026 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 OR2T34Q8NGX1 318 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 RP9Q8TA86 221 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 TWIST2Q8WVJ9 160 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 KLHL29Q96CT2 875 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 WDR26Q9H7D7 661 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 ARL15Q9NXU5 204 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 WWOXQ9NZC7 414 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 A0A1W2PQU0 124 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 PABPN1LA6NDY0 278 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 TMEM233B4DJY2 109 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 GIPC1O14908 333 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 JUNP05412 331 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 ESRRAP11474 423 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 EPB42P16452 691 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 EPHA3P29320 983 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 CCR5P51681 352 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 CLCNKAP51800 687 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 CTBSQ01459 385 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 KLF10Q13118 480 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 PTK2BQ14289 1009 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 SQLEQ14534 574 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 PTCRAQ6ISU1 281 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 PARP9Q8IXQ6 854 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 L3MBTL4Q8NA19 623 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 MAGEC3Q8TD91 643 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 PRR11Q96HE9 360 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 GUCD1Q96NT3 240 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 NELL2Q99435 816 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 OR52A5Q9H2C5 316 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 RASSF4Q9H2L5 321 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 WDR55Q9H6Y2 383 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 POLMQ9NP87 494 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 SEMA4BQ9NPR2 832 aaPredicted RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 GPRC5BQ9NZH0 403 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 ACSL5Q9ULC5 683 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 MRPS17Q9Y2R5 130 aaKnown RBP10.86□□□□□ -0.67
PDPN-202ENST00000376057 ASB1Q9Y576 335 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 CAPN7Q9Y6W3 813 aa10.86□□□□□ -0.67
PDPN-202ENST00000376057 TMEM202A6NGA9 273 aa10.85□□□□□ -0.67
PDPN-202ENST00000376057 NCF1BA6NI72 391 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 NCF1CA8MVU1 366 aaPredicted RBP10.85□□□□□ -0.67
PDPN-202ENST00000376057 PRR5-ARHGAP8B1AHC4 643 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms