RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TREX1Q9NSU2 369 aa12.71□□□□□ -0.37
MSH5-204ENST00000375755 ERVK-18Q9QC07 812 aa12.71□□□□□ -0.37
MSH5-204ENST00000375755 SCML2Q9UQR0 700 aa12.71□□□□□ -0.37
MSH5-204ENST00000375755 MYLKQ15746 1914 aa12.71□□□□□ -0.37
MSH5-204ENST00000375755 KIAA0100Q14667 2235 aaKnown RBP12.71□□□□□ -0.37
MSH5-204ENST00000375755 A0A1B0GTL3 188 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 E9PAM4 449 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 TBX1O43435 398 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 DNAJB2P25686 324 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 CD6P30203 668 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 HERVK_113P63132 956 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 TOP3AQ13472 1001 aaPredicted RBP12.71□□□□□ -0.38
MSH5-204ENST00000375755 LAPTM5Q13571 262 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 RCAN2Q14206 197 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 FXNQ16595 210 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 ALFQ53S48 1182 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 SLC22A15Q8IZD6 547 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 CNIH3Q8TBE1 160 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 RORBQ92753 470 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 RPL3LQ92901 407 aaKnown RBP12.71□□□□□ -0.38
MSH5-204ENST00000375755 PTERQ96BW5 349 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 VAT1Q99536 393 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 C17orf80Q9BSJ5 609 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 ERVK-6Q9BXR3 956 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 ATXN3LQ9H3M9 355 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 TBC1D14Q9P2M4 693 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 INTS6Q9UL03 887 aaKnown RBP12.71□□□□□ -0.38
MSH5-204ENST00000375755 PNMA8BQ9ULN7 279 aaPredicted RBP12.71□□□□□ -0.38
MSH5-204ENST00000375755 SZT2Q5T011 3432 aa12.71□□□□□ -0.38
MSH5-204ENST00000375755 M0QX08 132 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 SYN3O14994 580 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 EEDO75530 441 aaKnown RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 FGF4P08620 206 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ENO2P09104 434 aaPredicted RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 RAP2AP10114 183 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 CHRNB1P11230 501 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ATF6P18850 670 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 UFM1P61960 85 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 PPP2R2BQ00005 443 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 DGCR6Q14129 220 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 HECTD2Q5U5R9 776 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 KANK2Q63ZY3 851 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 DESI1Q6ICB0 168 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 HEATR4Q86WZ0 1026 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 PTGR2Q8N8N7 351 aaPredicted RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 PJA1Q8NG27 643 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 MCOLN3Q8TDD5 553 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 FBXO32Q969P5 355 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 RDH12Q96NR8 316 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 MARCH7Q9H992 704 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 DOCK4Q8N1I0 1966 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 NDST3O95803 873 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ITGB8P26012 769 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 GRK3P35626 688 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 CDKN2DP55273 166 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 EMX2Q04743 252 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 SELPLGQ14242 412 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ACOX1Q15067 660 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 NFE2Q16621 373 aaPredicted RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 NEK10Q6ZWH5 1172 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 PIM3Q86V86 326 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 MON1AQ86VX9 555 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 FAM83FQ8NEG4 500 aaPredicted RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 OR7G1Q8NGA0 311 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ITFG1Q8TB96 612 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 C8orf48Q96LL4 319 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ELAC1Q9H777 363 aaKnown RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 WBP1LQ9NX94 342 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 IL37Q9NZH6 218 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 LOC100130705A0A1B0GUX0 176 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ISPDA4D126 451 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 MAFKO60675 156 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 TULP3O75386 442 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 GJB3O75712 270 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 NKG7Q16617 165 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 FAM98BQ52LJ0 330 aaKnown RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 COLEC12Q5KU26 742 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 RSBN1Q5VWQ0 802 aaPredicted RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 KIAA0930Q6ICG6 404 aaPredicted RBP12.7□□□□□ -0.38
MSH5-204ENST00000375755 KLHDC8BQ8IXV7 354 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 TMEM199Q8N511 208 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ATL1Q8WXF7 558 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 IGSF8Q969P0 613 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ITCHQ96J02 903 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 ASPSCR1Q9BZE9 553 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 AASSQ9UDR5 926 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 FBXO10Q9UK96 956 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 UTS2RQ9UKP6 389 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 INVSQ9Y283 1065 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 PCDHGB1Q9Y5G3 927 aa12.7□□□□□ -0.38
MSH5-204ENST00000375755 CCDC154A6NI56 674 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 SYCE1LA8MT33 242 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
MSH5-204ENST00000375755 IDH3BO43837 385 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms