RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LCHNA4D1U4 455 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 LOC730098B7Z3J9 87 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 HOXB2P14652 356 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 ALAS2P22557 587 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 NFKB2Q00653 900 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 BHLHB9Q6PI77 547 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 DEF8Q6ZN54 512 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 CEP97Q8IW35 865 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 PHF21AQ96BD5 680 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 LYVE1Q9Y5Y7 322 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 AP4B1Q9Y6B7 739 aa17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 DDX60LQ5H9U9 1706 aaKnown RBP17.64■□□□□ 0.42
PTPDC1-202ENST00000375360 ZNF8P17098 575 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 TGFBIQ15582 683 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 NXPE1Q8N323 547 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 CAMKK1Q8N5S9 505 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 KRCC1Q9NPI7 259 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 FAM189A1O60320 539 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 BLVRAP53004 296 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 INO80DQ53TQ3 878 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 TIFABQ6ZNK6 161 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 CEP68Q76N32 757 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 C8orf59Q8N0T1 100 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC39A11Q8N1S5 342 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 KLHDC9Q8NEP7 349 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 NDUFA13Q9P0J0 144 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 YAP1P46937 504 aaKnown RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 C21orf59P57076 290 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 RAB30Q15771 203 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 VANGL1Q8TAA9 524 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF514Q96K75 400 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 NLE1Q9NVX2 485 aaPredicted RBP17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC7A8Q9UHI5 535 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 C3orf18Q9UK00 162 aa17.64■□□□□ 0.41
PTPDC1-202ENST00000375360 TTC34A8MYJ7 566 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 FOLH1Q04609 750 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 HSPB3Q12988 150 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 AAGABQ6PD74 315 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 PRSS58Q8IYP2 241 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 AADATQ8N5Z0 425 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 OR4F6Q8NGB9 312 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 RORBQ92753 470 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 TOP1MTQ969P6 601 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ANKRD27Q96NW4 1050 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 TDRD1Q9BXT4 1180 aaKnown RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 EDDM13A0A1B0GTR0 161 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ELOVL7A1L3X0 281 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 HEPACAM2A8MVW5 462 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 AURKAO14965 403 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 OR10H3O60404 316 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 BDKRB1P46663 353 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 NFATC2Q13469 925 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNHIT3Q15649 155 aaPredicted RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ADRM1Q16186 407 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 TTC23Q5W5X9 447 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 TMEM173Q86WV6 379 aaPredicted RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 SETD9Q8NE22 299 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 TFGQ92734 400 aaPredicted RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 VPS35Q96QK1 796 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 BRINP2Q9C0B6 783 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 POLMQ9NP87 494 aaPredicted RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF37AP17032 561 aaPredicted RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ACSBG2Q5FVE4 666 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 ANO7Q6IWH7 933 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 SUSD1Q6UWL2 747 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 FRMD7Q6ZUT3 714 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC43A3Q8NBI5 491 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 KIAA1191Q96A73 305 aa17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 PGAP3Q96FM1 320 aaPredicted RBP17.63■□□□□ 0.41
PTPDC1-202ENST00000375360 LRRC14BA6NHZ5 514 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 ASMTP46597 345 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 GSCP56915 257 aaPredicted RBP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 SPIBQ01892 262 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 SLBPQ14493 270 aaKnown RBP eCLIP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 ZBTB46Q86UZ6 589 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 TMEM174Q8WUU8 243 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC9A6Q92581 669 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 RNF38Q9H0F5 515 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 MAGEL2Q9UJ55 1249 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 GMPPBQ9Y5P6 360 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 PKDCCQ504Y2 493 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 RANBP10Q6VN20 620 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF605Q86T29 641 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF784Q8NCA9 323 aaPredicted RBP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 OR2T34Q8NGX1 318 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 OR2T3Q8NH03 318 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 NSUN5Q96P11 429 aaKnown RBP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 KLHL25Q9H0H3 589 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 SRMSQ9H3Y6 488 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 NENFQ9UMX5 172 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 RPL26L1Q9UNX3 145 aaKnown RBP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 GBAP04062 536 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 TRIM25Q14258 630 aaKnown RBP17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 GPR135Q8IZ08 494 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 TMEM145Q8NBT3 493 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC13A3Q8WWT9 602 aa17.62■□□□□ 0.41
PTPDC1-202ENST00000375360 ABCG4Q9H172 646 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms