RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 KBTBD13C9JR72 458 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CCR4P51679 360 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 EPHA10Q5JZY3 1008 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZNF366Q8N895 744 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SNX33Q8WV41 574 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 OR52B2Q96RD2 323 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 M0R129 80 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SRPRAP08240 638 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 COX7A2P14406 83 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ITGB6P18564 788 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ACSM2AQ08AH3 577 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SLC1A5Q15758 541 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 PROX2Q3B8N5 592 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ACSM2BQ68CK6 577 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ASB18Q6ZVZ8 466 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 ZNF709Q8N972 641 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 EXOSC1Q9Y3B2 195 aaKnown RBP6.53□□□□□ -1.36
UBR4-204ENST00000375254 A0A087WZY1 265 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 LGR5O75473 907 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 FMO1Q01740 532 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 NTRK3Q16288 839 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 CADM2Q8N3J6 435 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 OR1M1Q8NGA1 313 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 SMARCD2Q92925 531 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 TMEM203Q969S6 136 aa6.53□□□□□ -1.36
UBR4-204ENST00000375254 NCANO14594 1321 aa6.52□□□□□ -1.36
UBR4-204ENST00000375254 A0A1W2PPW3 197 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 DCAF8L1A6NGE4 600 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 BMP1P13497 986 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SPI1P17947 270 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 HOXD13P35453 343 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PRSS48Q7RTY5 328 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TMC8Q8IU68 726 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 HAVCR2Q8TDQ0 301 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 LXNQ9BS40 222 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PCDHGA1Q9Y5H4 931 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TFPTP0C1Z6 253 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 GLRA2P23416 452 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MAT2AP31153 395 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 RNF4P78317 190 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SPIBQ01892 262 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 DUSP6Q16828 381 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 SLC36A4Q6YBV0 504 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.52□□□□□ -1.37
UBR4-204ENST00000375254 TMEM161BQ8NDZ6 487 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ACOT13Q9NPJ3 140 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MAN1C1Q9NR34 630 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ZMYM5Q9UJ78 669 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 H0YGN5 161 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 FOXO3O43524 673 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ZBTB14O43829 449 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MICAL2O94851 1124 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 IL1BP01584 269 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ALDH3B1P43353 468 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PRKXP51817 358 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MAP4K2Q12851 820 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PFKFB4Q16877 469 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 OR2T5Q6IEZ7 315 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 OR2T29Q8NH02 315 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CSGALNACT1Q8TDX6 532 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TFAP2CQ92754 450 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 OSTF1Q92882 214 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 COA7Q96BR5 231 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 HSFY1Q96LI6 401 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PNPOQ9NVS9 261 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 VSX1Q9NZR4 365 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 NFS1Q9Y697 457 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 CHRNA5P30532 468 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TLX1P31314 330 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 HOXA1P49639 335 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 REEP5Q00765 189 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 MKRN4PQ13434 485 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 GAREM2Q75VX8 874 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 OR2AP1Q8NGE2 309 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 NUDT16L1Q9BRJ7 211 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 DCAF16Q9NXF7 216 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 UXTQ9UBK9 157 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 OAZ3Q9UMX2 235 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 EI24O14681 340 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 GH1P01241 217 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 DLDP09622 509 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 RAP2BP61225 183 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TLE3Q04726 772 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 C2orf80Q0P641 193 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 RAB30Q15771 203 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 PAN3Q58A45 887 aaKnown RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 TMEM41BQ5BJD5 291 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 RAP1GAP2Q684P5 730 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 BLOC1S3Q6QNY0 202 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 LSMEM1Q8N8F7 131 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 TRIM43Q96BQ3 446 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 PKP2Q99959 881 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 ACBD6Q9BR61 282 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 B3GNT5Q9BYG0 378 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 POMKQ9H5K3 350 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 NMRK2Q9NPI5 230 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 KDM6AO15550 1401 aaPredicted RBP6.52□□□□□ -1.37
UBR4-204ENST00000375254 IFNW1P05000 195 aa6.52□□□□□ -1.37
UBR4-204ENST00000375254 HOXD8P13378 290 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms