RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 RERGLQ9H628 205 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 HPS4Q9NQG7 708 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TRMT13Q9NUP7 481 aaKnown RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ADGRE2Q9UHX3 823 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TMEFF2Q9UIK5 374 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ADAMTS5Q9UNA0 930 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ABCG2Q9UNQ0 655 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 POLR3HQ9Y535 204 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 PSME4Q14997 1843 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 PCM1Q15154 2024 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 A0A087X1B8 175 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 MAGEB16A2A368 324 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 RFPL2O75678 378 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CCNKO75909 580 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 KRT75O95678 551 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 LGALS2P05162 132 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GPIP06744 558 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 HMBSP08397 361 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 IFI30P13284 250 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DPEP1P16444 411 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CD36P16671 472 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 JUNBP17275 347 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 NPR3P17342 541 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TTKP33981 857 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ADRA1AP35348 466 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 EIF2DP41214 584 aaKnown RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ADCYAP1R1P41586 468 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GMPSP49915 693 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 NKX3-2P78367 333 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 VAC14Q08AM6 782 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CLCA4Q14CN2 919 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TAB1Q15750 504 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GPR162Q16538 588 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CYP27C1Q4G0S4 372 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 KANK2Q63ZY3 851 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TAF2Q6P1X5 1199 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 KLHL17Q6TDP4 642 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CCBE1Q6UXH8 406 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 Q6ZSR9 355 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GLCCI1Q86VQ1 547 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 P2RY8Q86VZ1 359 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 METTL4Q8N3J2 472 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CADM2Q8N3J6 435 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 RNF175Q8N4F7 328 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TMEM199Q8N511 208 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF540Q8NDQ6 660 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 C3orf58Q8NDZ4 430 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 C7orf57Q8NEG2 295 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 MCFD2Q8NI22 146 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 PNPT1Q8TCS8 783 aaKnown RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 NETO1Q8TDF5 533 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 RORBQ92753 470 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 LPPQ93052 612 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 MYEOVQ96EZ4 313 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 NRBF2Q96F24 287 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 OSBPL10Q9BXB5 764 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DUSP16Q9BY84 665 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SP110Q9HB58 689 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 BPIFA1Q9NP55 256 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 MRPL40Q9NQ50 206 aaKnown RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SLC25A37Q9NYZ2 338 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TMEM9Q9P0T7 183 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 OPTCQ9UBM4 332 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SEPT3Q9UH03 358 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF639Q9UID6 485 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 NEU3Q9UQ49 428 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 B3GNT3Q9Y2A9 372 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 PLXNA1Q9UIW2 1896 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 COL2A1P02458 1487 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CCDC162PA2VCL2 907 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BTN3A1O00481 513 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CTDSP2O14595 271 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SCAMP3O14828 347 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BCKDKO14874 412 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 LRRTM2O43300 516 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TBC1D4O60343 1298 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SH3BGRLO75368 114 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ECI2O75521 394 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 SCO1O75880 301 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 GABARAPO95166 117 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 GUCA1CO95843 209 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 FHP07954 510 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ADRA2AP08913 450 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 RBP1P09455 135 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 OR4Q2P0C623 313 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 HSMCR30P0CW71 290 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CYP2C8P10632 490 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CHRNB1P11230 501 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 HOXD8P13378 290 aaPredicted RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 TNFRSF1BP20333 461 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 GADD45AP24522 165 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DCTP40126 519 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CLK1P49759 484 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 HK3P52790 923 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 DAOAP59103 153 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 LILRA4P59901 499 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 PPP2R2BQ00005 443 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 ALDH6A1Q02252 535 aaKnown RBP5.32□□□□□ -1.56
ATG4A-204ENST00000372246 CHRNB3Q05901 458 aa5.32□□□□□ -1.56
ATG4A-204ENST00000372246 BNIP2Q12982 314 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms