RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CXorf40BQ96DE9 158 aa15.58■□□□□ 0.08
PFDN4-201ENST00000371419 RMDN2Q96LZ7 410 aa15.58■□□□□ 0.08
PFDN4-201ENST00000371419 CCDC3Q9BQI4 270 aa15.58■□□□□ 0.08
PFDN4-201ENST00000371419 OR52A5Q9H2C5 316 aa15.58■□□□□ 0.08
PFDN4-201ENST00000371419 CNOT10Q9H9A5 744 aaKnown RBP15.58■□□□□ 0.08
PFDN4-201ENST00000371419 PPCSQ9HAB8 311 aa15.58■□□□□ 0.08
PFDN4-201ENST00000371419 NSMCE4AQ9NXX6 385 aa15.58■□□□□ 0.08
PFDN4-201ENST00000371419 E5RI56 91 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 IFRD1O00458 451 aaPredicted RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 ZW10O43264 779 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 PDHA2P29803 388 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 STX2P32856 288 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 GPR3P46089 330 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 CD151P48509 253 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 PPP2R2AP63151 447 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 HSPA14Q0VDF9 509 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 CAPRIN2Q6IMN6 1127 aaKnown RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 ZNF549Q6P9A3 640 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 OTOAQ7RTW8 1153 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 STRA8Q7Z7C7 330 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 RIBC1Q8N443 379 aaPredicted RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 C12orf66Q96MD2 445 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 INSM2Q96T92 566 aaPredicted RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 AARSD1Q9BTE6 412 aaKnown RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 POT1Q9NUX5 634 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 IMP3Q9NV31 184 aaKnown RBP15.57■□□□□ 0.08
PFDN4-201ENST00000371419 RABGEF1Q9UJ41 708 aa15.57■□□□□ 0.08
PFDN4-201ENST00000371419 RP1P56715 2156 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 FAM159BA6NKW6 160 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 GPC4O75487 556 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 MTHFD1P11586 935 aaKnown RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 PHBP35232 272 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 CSE1LP55060 971 aaKnown RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 MAGOHP61326 146 aaKnown RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 NR1D2Q14995 579 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 PLEKHS1Q5SXH7 462 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 N4BP2L1Q5TBK1 243 aaPredicted RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 TAOK1Q7L7X3 1001 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 PDZD3Q86UT5 571 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 RBM12BQ8IXT5 1001 aaKnown RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 Q8N9G6 341 aaPredicted RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 UHMK1Q8TAS1 419 aaKnown RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 FBF1Q8TES7 1133 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 ADAMTS14Q8WXS8 1223 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 KCNJ9Q92806 393 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 FAM136AQ96C01 138 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 SLC38A3Q99624 504 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 ABCG4Q9H172 646 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 SMYD2Q9NRG4 433 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 LATS2Q9NRM7 1088 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 CORO1CQ9ULV4 474 aaPredicted RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 HEBP2Q9Y5Z4 205 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 PSAT1Q9Y617 370 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 CFAP20Q9Y6A4 193 aaKnown RBP15.56■□□□□ 0.08
PFDN4-201ENST00000371419 CACNA1AO00555 2505 aa15.56■□□□□ 0.08
PFDN4-201ENST00000371419 SPEGQ15772 3267 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 SRRM3A6NNA2 597 aaPredicted RBP15.55■□□□□ 0.08
PFDN4-201ENST00000371419 CXorf49A8MYA2 514 aaPredicted RBP15.55■□□□□ 0.08
PFDN4-201ENST00000371419 SLCO2B1O94956 709 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 ALDH4A1P30038 563 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 HPDP32754 393 aaPredicted RBP15.55■□□□□ 0.08
PFDN4-201ENST00000371419 MDH1P40925 334 aaKnown RBP15.55■□□□□ 0.08
PFDN4-201ENST00000371419 ABCG1P45844 678 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 TNFAIP8L3Q5GJ75 292 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 DHRS13Q6UX07 377 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 SPRED1Q7Z699 444 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 SLC22A15Q8IZD6 547 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 WDR48Q8TAF3 677 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 EPS8L3Q8TE67 593 aaKnown RBP15.55■□□□□ 0.08
PFDN4-201ENST00000371419 NDNQ99608 321 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 UCK1Q9HA47 277 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 SLC40A1Q9NP59 571 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 TXNDC16Q9P2K2 825 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 KLHL42Q9P2K6 505 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 CDYLQ9Y232 598 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 MED16Q9Y2X0 877 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 COLEC10Q9Y6Z7 277 aa15.55■□□□□ 0.08
PFDN4-201ENST00000371419 CDH16O75309 829 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 VPS26AO75436 327 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 PIAS1O75925 651 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 C1QAP02745 245 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 ACADLP28330 430 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 NDUFS1P28331 727 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 ATP1A2P50993 1020 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 CLCN7P51798 805 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 OR1D5P58170 312 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 GNGT1P63211 74 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 ILF2Q12905 390 aaKnown RBP15.54■□□□□ 0.08
PFDN4-201ENST00000371419 KRT33BQ14525 404 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 TTLL9Q3SXZ7 439 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 KBTBD12Q3ZCT8 623 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 TMEM26Q6ZUK4 368 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 ZNF761Q86XN6 746 aaPredicted RBP15.54■□□□□ 0.08
PFDN4-201ENST00000371419 VRK3Q8IV63 474 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 CTAGE3PQ8IX95 158 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 ZBTB2Q8N680 514 aa15.54■□□□□ 0.08
PFDN4-201ENST00000371419 TFGQ92734 400 aaPredicted RBP15.54■□□□□ 0.08
PFDN4-201ENST00000371419 KCNK4Q9NYG8 393 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms