RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 FBXL20Q96IG2 436 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 AIF1LQ9BQI0 150 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 PRAMEF33A0A0G2JMD5 474 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 OR10H2O60403 315 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 PRAMEF10O60809 474 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 NME6O75414 186 aaPredicted RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 CHRM5P08912 532 aaPredicted RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 CORO1AP31146 461 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 HNMTP50135 292 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC39A4Q6P5W5 647 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF773Q6PK81 442 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 C9orf43Q8TAL5 461 aaPredicted RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 RASSF5Q8WWW0 418 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 FTHL17Q9BXU8 183 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 TRIT1Q9H3H1 467 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 ACOX3O15254 700 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 ACADVLP49748 655 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 TAF1AQ15573 450 aaPredicted RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 IQCCQ4KMZ1 466 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 RFKQ969G6 155 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 NDOR1Q9UHB4 597 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 RUVBL1Q9Y265 456 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 URADA6NGE7 173 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 DNAJB1P25685 340 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 DNAJA1P31689 397 aaKnown RBP16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 TUBA3CQ13748 450 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC25A24Q6NUK1 477 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC22A16Q86VW1 577 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 SLC22A4Q9H015 551 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 MFSD1Q9H3U5 465 aa16.87■□□□□ 0.29
PTP4A1-201ENST00000370651 A0A1W2PQ72 361 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 TBC1D3BA6NDS4 549 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ATG13O75143 517 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 CCDC157Q569K6 752 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 TPRG1LQ5T0D9 272 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 OLFML2AQ68BL7 652 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 MED27Q6P2C8 311 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 CIR1Q86X95 450 aaPredicted RBP16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 TMEM192Q8IY95 271 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF433Q8N7K0 673 aaPredicted RBP16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 RSPH9Q9H1X1 276 aaPredicted RBP16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 FBXO10Q9UK96 956 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ACSL4O60488 711 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 MNDAP41218 407 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 RABGGTBP53611 331 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 SMARCB1Q12824 385 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 PPP1R8Q12972 351 aaKnown RBP16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 MAP2K5Q13163 448 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ISOC1Q96CN7 298 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 KCNN2Q9H2S1 579 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 EQTNQ9NQ60 294 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ARL5AQ9Y689 179 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ISM1B1AKI9 464 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF132P52740 706 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 RGS1Q08116 209 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 PTF1AQ7RTS3 328 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 OAFQ86UD1 273 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 LMO3Q8TAP4 145 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 BORCS6Q96GS4 357 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 CDK15Q96Q40 435 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 EHD1Q9H4M9 534 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 TBC1D17Q9HA65 648 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 PIGVQ9NUD9 493 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 CARD8Q9Y2G2 431 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 PCDHGB3Q9Y5G1 929 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 PSAT1Q9Y617 370 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 A0A1W2PP18 115 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 FAM25EA8MYX2 175 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 K7EPI3 171 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 STX16O14662 325 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ABCB7O75027 752 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 HLA-DQB2P05538 268 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 OR1D2P34982 312 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 CDH4P55283 916 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 FAM43BQ6ZT52 329 aaPredicted RBP16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ASRGL1Q7L266 308 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 MARVELD2Q8N4S9 558 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 OR10G2Q8NGC3 310 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 OR13C4Q8NGS5 318 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ASAH2Q9NR71 780 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 COMMD3Q9UBI1 195 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 ADAMTS6Q9UKP5 1117 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 BAIAP2Q9UQB8 552 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 PRKAB1Q9Y478 270 aa16.86■□□□□ 0.29
PTP4A1-201ENST00000370651 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 RGS8P57771 180 aaPredicted RBP16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 BEND5Q7L4P6 421 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 LRRC20Q8TCA0 184 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 BIRC7Q96CA5 298 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 MALT1Q9UDY8 824 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 ABCC6O95255 1503 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 ECI2O75521 394 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 CDK14O94921 469 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 IFNA16P05015 189 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SAGP10523 405 aaPredicted RBP16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 SH3D19Q5HYK7 790 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 DENND1AQ8TEH3 1009 aa16.85■□□□□ 0.29
PTP4A1-201ENST00000370651 CEP295NLQ96MC4 621 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms