RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TUBA1AQ71U36 451 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 PTF1AQ7RTS3 328 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 DEFB128Q7Z7B8 93 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 CIR1Q86X95 450 aaPredicted RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 TRNT1Q96Q11 434 aaKnown RBP15.68■□□□□ 0.1
COL17A1-202ENST00000369733 MCMBPQ9BTE3 642 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 MFSD1Q9H3U5 465 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 SPEF1Q9Y4P9 236 aa15.68■□□□□ 0.1
COL17A1-202ENST00000369733 A0A1W2PP18 115 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 TSPAN4O14817 238 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ECI2O75521 394 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RLN1P04808 185 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ELK4P28324 431 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 TLX1P31314 330 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 PTGER3P43115 390 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 DGKQP52824 942 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF423Q2M1K9 1284 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 IQCCQ4KMZ1 466 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 PIWIL1Q96J94 861 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 KCNC2Q96PR1 638 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF347Q96SE7 839 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SYNDIG1Q9H7V2 258 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 MKS1Q9NXB0 559 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 MYBPHLA2RUH7 354 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 INSIG1O15503 277 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 YES1P07947 543 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 T-ENOLP0DO92 83 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SPAM1P38567 509 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SMAD3P84022 425 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RHAGQ02094 409 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 IL10RBQ08334 325 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RBM20Q5T481 1227 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RD3Q7Z3Z2 195 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SERPINA9Q86WD7 417 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 BCO2Q9BYV7 579 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 M0QX08 132 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ATF4P18848 351 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SLC15A1P46059 708 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 VBP1P61758 197 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SRSF11Q05519 484 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 CHIT1Q13231 466 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 FNDC3BQ53EP0 1204 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RAD51AP1Q96B01 352 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 PIGVQ9NUD9 493 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 COMMD3Q9UBI1 195 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 BAIAP2Q9UQB8 552 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 OR6C70A6NIJ9 312 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 PER2O15055 1255 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 INMTO95050 263 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ALDOAP04075 364 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 SCNN1AP37088 669 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RAVER1Q8IY67 606 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 POLR2J2Q9GZM3 115 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 MAT2BQ9NZL9 334 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 KERAO60938 352 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 GLDCP23378 1020 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 CDH5P33151 784 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 CLCNKBP51801 687 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 TUSC3Q13454 348 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 TAF1AQ15573 450 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF404Q494X3 552 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 RFTN2Q52LD8 501 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF517Q6ZMY9 492 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 DSG4Q86SJ6 1040 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 OR10G2Q8NGC3 310 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 XAGE5Q8WWM1 108 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 TBC1D17Q9HA65 648 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 MRPL17Q9NRX2 175 aaKnown RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 TAS2R7Q9NYW3 318 aa15.67■□□□□ 0.1
COL17A1-202ENST00000369733 NFKBIL1Q9UBC1 381 aaPredicted RBP15.67■□□□□ 0.1
COL17A1-202ENST00000369733 MYH10P35580 1976 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 FBP2O00757 339 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 NUDT14O95848 222 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 FAUP35544 74 aaKnown RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 PIM3Q86V86 326 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 POMGNT2Q8NAT1 580 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 OR13C4Q8NGS5 318 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 NRG4Q8WWG1 115 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 CRELD1Q96HD1 420 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 PRKAB1Q9Y478 270 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 AURKAO14965 403 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 MMP3P08254 477 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 ANXA8P13928 327 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 BIKQ13323 160 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 NAE1Q13564 534 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 SPATS1Q496A3 300 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 C9orf43Q8TAL5 461 aaPredicted RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 ZNF641Q96N77 438 aaPredicted RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 ACAT2Q9BWD1 397 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 IRF2BPLQ9H1B7 796 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 TTYH1Q9H313 450 aaPredicted RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 COL1A1P02452 1464 aaPredicted RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 KLRG2A4D1S0 409 aaPredicted RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 FOXD2O60548 495 aaPredicted RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 PCSK2P16519 638 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 VARSP26640 1264 aaKnown RBP15.66■□□□□ 0.1
COL17A1-202ENST00000369733 CEACAM7Q14002 265 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 OR2T5Q6IEZ7 315 aa15.66■□□□□ 0.1
COL17A1-202ENST00000369733 PRR23BQ6ZRT6 265 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms