RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 LINC01553A4QN01 128 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 ZNF197O14709 1029 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 RNASEH1O60930 286 aaKnown RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 C1SP09871 688 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 UQCRBP14927 111 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 PSMA4P25789 261 aaKnown RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 LIPEQ05469 1076 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 KRT80Q6KB66 452 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 ADIPOR2Q86V24 386 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 PDSS2Q86YH6 399 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 SLC22A15Q8IZD6 547 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 AHI1Q8N157 1196 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 C2orf73Q8N5S3 287 aaPredicted RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 GANCQ8TET4 914 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 HOPXQ9BPY8 73 aaPredicted RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 TRIM15Q9C019 465 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 IL36AQ9UHA7 158 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 MAFFQ9ULX9 164 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 A0A1W2PP18 115 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 OR7A17O14581 309 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 ADH5P11766 374 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 PCNAP12004 261 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 NRIP1P48552 1158 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 POLE2P56282 527 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 YBX1P67809 324 aaKnown RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 PDK3Q15120 406 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 FAM174BQ3ZCQ3 159 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 RAVER1Q8IY67 606 aaKnown RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 LILRA2Q8N149 483 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 MIEF2Q96C03 454 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 ROPN1LQ96C74 230 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 ZNF641Q96N77 438 aaPredicted RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 ALG2Q9H553 416 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 GPR45Q9Y5Y3 372 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 CHD5Q8TDI0 1954 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 NUMA1Q14980 2115 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 C16orf96A6NNT2 1141 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 BBIP1A8MTZ0 92 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 TAPBPO15533 448 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 TULP3O75386 442 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 PGM3O95394 542 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 CYP2A7P20853 494 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 GNPDA1P46926 289 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 IRF8Q02556 426 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 GPM6BQ13491 265 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 STARD3Q14849 445 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 TRMT11Q7Z4G4 463 aaKnown RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 ST13P4Q8IZP2 240 aaPredicted RBP13.54□□□□□ -0.24
SHC1-202ENST00000368445 LIX1Q8N485 282 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 LMNTD1Q8N9Z9 388 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 ASZ1Q8WWH4 475 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 RHBDF1Q96CC6 855 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 AIG1Q9NVV5 245 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 MOSPD1Q9UJG1 213 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 USP22Q9UPT9 525 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 PDE10AQ9Y233 779 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 OARD1Q9Y530 152 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 AP4B1Q9Y6B7 739 aa13.54□□□□□ -0.24
SHC1-202ENST00000368445 CLDN9O95484 217 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 ADARP55265 1226 aaKnown RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 FOXD4Q12950 439 aaPredicted RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 MAPKAPK3Q16644 382 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 RAET1GQ6H3X3 334 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 FAM109BQ6ICB4 259 aaPredicted RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 PSRC1Q6PGN9 363 aaPredicted RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 BRAT1Q6PJG6 821 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 SYTL1Q8IYJ3 562 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 FIG4Q92562 907 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 APOLD1Q96LR9 279 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 RNF145Q96MT1 663 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 LRTM1Q9HBL6 345 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 TMCO1Q9UM00 188 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 DHRS12A0PJE2 317 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 ACOT8O14734 319 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 SLC6A11P48066 632 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 NAE1Q13564 534 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 CRTC3Q6UUV7 619 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 LILRA3Q8N6C8 439 aaPredicted RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 PPP3R2Q96LZ3 170 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 MTERF1Q99551 399 aaKnown RBP13.53□□□□□ -0.24
SHC1-202ENST00000368445 COQ10BQ9H8M1 238 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 PRKAB1Q9Y478 270 aa13.53□□□□□ -0.24
SHC1-202ENST00000368445 SLC6A2P23975 617 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 CSNK1DP48730 415 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 RHDQ02161 417 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 TCEA2Q15560 299 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 FAM217AQ8IXS0 508 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 RGL4Q8IZJ4 473 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 OR2T34Q8NGX1 318 aa13.52□□□□□ -0.24
SHC1-202ENST00000368445 OR2T3Q8NH03 318 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms