RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 BNC1Q01954 994 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PDGFRLQ15198 375 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 ADGRF1Q5T601 910 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TPGS2Q68CL5 300 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 KRT74Q7RTS7 529 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 ARHGAP39Q9C0H5 1083 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 NECTIN3Q9NQS3 549 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 SSR3Q9UNL2 185 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 KCTD3Q9Y597 815 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PARP4Q9UKK3 1724 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 TRAFD1O14545 582 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 SNUPNO95149 360 aaKnown RBP12.7□□□□□ -0.38
PTPRK-207ENST00000368226 PTPRCAPQ14761 206 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 SNX20Q7Z614 316 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 OAFQ86UD1 273 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 POC5Q8NA72 575 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 SIPA1Q96FS4 1042 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 COPS7AQ9UBW8 275 aa12.7□□□□□ -0.38
PTPRK-207ENST00000368226 DDX6P26196 483 aaKnown RBP eCLIP12.69□□□□□ -0.381e-7■■■■■ 60
PTPRK-207ENST00000368226 AVPR1BP47901 424 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 DPYSL2Q16555 572 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 SFRP1Q8N474 314 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 FUBP3Q96I24 572 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■□□□ 13.2
PTPRK-207ENST00000368226 FAM86C2PA6NEL3 165 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 MAGEB17A8MXT2 336 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 PLIN3O60664 434 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 HMGCS1Q01581 520 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 ARMC3Q5W041 872 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 RASGRP3Q8IV61 690 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 OR2T34Q8NGX1 318 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 OR2T3Q8NH03 318 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 LRTOMTQ8WZ04 291 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 MCCC1Q96RQ3 725 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 ESR1P03372 595 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 C8GP07360 202 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 ALOX5P09917 674 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 PRMT2P55345 433 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 PPP2R2BQ00005 443 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 PIK3R6Q5UE93 754 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 RPS27LQ71UM5 84 aaKnown RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 COX18Q8N8Q8 333 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 HAPLN3Q96S86 360 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 ADAP2Q9NPF8 381 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 FBXL12Q9NXK8 326 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 BTBD3Q9Y2F9 522 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 TEX28O15482 410 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 NOBOXO60393 691 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 GSTT1P30711 240 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 CLCNKAP51800 687 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 ADARP55265 1226 aaKnown RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 NFKB2Q00653 900 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 SLC9B1Q4ZJI4 515 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 FAM46DQ8NEK8 389 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 OR5M3Q8NGP4 307 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 ZNF483Q8TF39 744 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-207ENST00000368226 POF1BQ8WVV4 589 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 KCNK6Q9Y257 313 aa12.69□□□□□ -0.38
PTPRK-207ENST00000368226 TGDSO95455 350 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 ALPPL2P10696 532 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 TYRP14679 529 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 SLC26A3P40879 764 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 DCST1Q5T197 706 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 PNPLA3Q9NST1 481 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 BCKDKO14874 412 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 NDUFS4O43181 175 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 DCAF12L1Q5VU92 463 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 TMEM130Q8N3G9 435 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 ZDHHC4Q9NPG8 344 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 UBAP2Q5T6F2 1119 aaKnown RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 PQLC1Q8N2U9 271 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 GRHL3Q8TE85 626 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 CXorf49A8MYA2 514 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 MAGEB3O15480 346 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 PDPK1O15530 556 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 CNTN5O94779 1100 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 IFNW1P05000 195 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 GNSP15586 552 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 CDK9P50750 372 aaKnown RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 FRRS1Q6ZNA5 592 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 IQCHQ86VS3 1027 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 CHERPQ8IWX8 916 aaKnown RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 C12orf76Q8N812 135 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 SRFBP1Q8NEF9 429 aaKnown RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 SLC35G5Q96KT7 338 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 ZNF570Q96NI8 536 aa12.68□□□□□ -0.38
PTPRK-207ENST00000368226 CRNNQ9UBG3 495 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-207ENST00000368226 COL1A1P02452 1464 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms