RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CAPZBP47756 277 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ITGA8P53708 1063 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 PRKG2Q13237 762 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 KRT33BQ14525 404 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ANKRD20A4Q4UJ75 823 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ZNF789Q5FWF6 425 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 AARS2Q5JTZ9 985 aaKnown RBP14.29□□□□□ -0.12
SF3B5-201ENST00000367569 CTSL3PQ5NE16 218 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ZNF470Q6ECI4 717 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 TMEM71Q6P5X7 295 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ZFAND4Q86XD8 727 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 IGDCC3Q8IVU1 814 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 DENND6AQ8IWF6 608 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 LMNTD1Q8N9Z9 388 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 OR5AR1Q8NGP9 310 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 TMEM159Q96B96 161 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 STAMBPL1Q96FJ0 436 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 MED8Q96G25 268 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 CFAP36Q96G28 342 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 SIGLEC10Q96LC7 697 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 PPM1MQ96MI6 270 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 FERD3LQ96RJ6 166 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 CMKLR1Q99788 373 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 CTRCQ99895 268 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 WDR83Q9BRX9 315 aaKnown RBP14.29□□□□□ -0.12
SF3B5-201ENST00000367569 XKR8Q9H6D3 395 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
SF3B5-201ENST00000367569 ACSL5Q9ULC5 683 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 CHMP2BQ9UQN3 213 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 CRYL1Q9Y2S2 319 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
SF3B5-201ENST00000367569 SNRNP200O75643 2136 aaKnown RBP14.29□□□□□ -0.12
SF3B5-201ENST00000367569 SDR42E2A6NKP2 422 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 EFCAB7A8K855 629 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 B8ZZF3 427 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 C9orf172C9J069 976 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 CCDC188H7C350 402 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 AP3B1O00203 1094 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 CAPN5O15484 640 aaPredicted RBP14.28□□□□□ -0.12
SF3B5-201ENST00000367569 RAD51CO43502 376 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 KCNJ13O60928 360 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 RASSF9O75901 435 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 MLNP12872 115 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 FMO4P31512 558 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 CCR7P32248 378 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 SLC1A2P43004 574 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 TTPAP49638 278 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 MPP1Q00013 466 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 MN1Q10571 1320 aaPredicted RBP14.28□□□□□ -0.12
SF3B5-201ENST00000367569 LYPLAL1Q5VWZ2 237 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
SF3B5-201ENST00000367569 CAPRIN2Q6IMN6 1127 aaKnown RBP14.28□□□□□ -0.12
SF3B5-201ENST00000367569 FBXO38Q6PIJ6 1188 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 ANKMY2Q8IV38 441 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 AVL9Q8NBF6 648 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 PEX13Q92968 403 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 ART4Q93070 314 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 TTC1Q99614 292 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 C20orf96Q9NUD7 363 aaPredicted RBP14.28□□□□□ -0.12
SF3B5-201ENST00000367569 SLC24A2Q9UI40 661 aa14.28□□□□□ -0.12
SF3B5-201ENST00000367569 TLN1Q9Y490 2541 aaKnown RBP14.28□□□□□ -0.12
SF3B5-201ENST00000367569 ZCWPW2A0A1B0GU75 182 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 FAM237BA0A1B0GVD1 139 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 OR6C74A6NCV1 312 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 EFCAB8A8MWE9 144 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 J3QKU1 62 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 IFRD1O00458 451 aaPredicted RBP14.27□□□□□ -0.13
SF3B5-201ENST00000367569 PRMT5O14744 637 aaPredicted RBP14.27□□□□□ -0.13
SF3B5-201ENST00000367569 FGF3P11487 239 aaPredicted RBP14.27□□□□□ -0.13
SF3B5-201ENST00000367569 PAMP19021 973 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CSTF2P33240 577 aaKnown RBP eCLIP14.27□□□□□ -0.13
SF3B5-201ENST00000367569 HSPA14Q0VDF9 509 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CTBP1Q13363 440 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CRYMQ14894 314 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 LINC00303Q3SY05 128 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CERS6Q6ZMG9 384 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CAPN12Q6ZSI9 719 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CENPUQ71F23 418 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 VASH2Q86V25 355 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 DTX1Q86Y01 620 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 EXD3Q8N9H8 876 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 CFAP61Q8NHU2 1237 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 LPGAT1Q92604 370 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 SNF8Q96H20 258 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 P2RY12Q9H244 342 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 KIR3DX1Q9H7L2 352 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 UCK1Q9HA47 277 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 APMAPQ9HDC9 416 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 TDRKHQ9Y2W6 561 aaKnown RBP14.27□□□□□ -0.13
SF3B5-201ENST00000367569 MYO18BQ8IUG5 2567 aa14.27□□□□□ -0.13
SF3B5-201ENST00000367569 SPTA1P02549 2419 aa14.26□□□□□ -0.13
SF3B5-201ENST00000367569 C17orf113A0A1B0GUU1 675 aa14.26□□□□□ -0.13
SF3B5-201ENST00000367569 SLC5A10A0PJK1 596 aa14.26□□□□□ -0.13
SF3B5-201ENST00000367569 BHMG1C9JSJ3 638 aaPredicted RBP14.26□□□□□ -0.13
SF3B5-201ENST00000367569 LIN7AO14910 233 aaPredicted RBP14.26□□□□□ -0.13
SF3B5-201ENST00000367569 URI1O94763 535 aaPredicted RBP14.26□□□□□ -0.13
SF3B5-201ENST00000367569 SEC31AO94979 1220 aaKnown RBP14.26□□□□□ -0.13
SF3B5-201ENST00000367569 PGAM1P18669 254 aa14.26□□□□□ -0.13
SF3B5-201ENST00000367569 POLR2CP19387 275 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms