RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PCDHAC1Q9H158 963 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 VCXQ9H320 206 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 MUC13Q9H3R2 512 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 ARL15Q9NXU5 204 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 PDE10AQ9Y233 779 aa17.93■□□□□ 0.46
PDLIM7-203ENST00000359895 C15orf38-AP3S2A0A0A6YYH1 394 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 TCRBV3S1A0A5B6 114 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 FXYD1O00168 92 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 NME4O00746 187 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 PER2O15055 1255 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 CTSLP07711 333 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 CYP2A7P20853 494 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 GPM6BQ13491 265 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 ABRAXAS2Q15018 415 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 LRRC36Q1X8D7 754 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 AP5B1Q2VPB7 878 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 C6orf10Q5SRN2 563 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 LDLRAP1Q5SW96 308 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 HENMT1Q5T8I9 393 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 ARPINQ7Z6K5 226 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 ZFAND4Q86XD8 727 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC15A3Q8IY34 581 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 NRSN1Q8IZ57 195 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 GOLM1Q8NBJ4 401 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 ASB11Q8WXH4 323 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 MYLIPQ8WY64 445 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 ABCG8Q9H221 673 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 COPS7BQ9H9Q2 264 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 IL1RL2Q9HB29 575 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 AP4S1Q9Y587 144 aa17.92■□□□□ 0.46
PDLIM7-203ENST00000359895 C2orf16Q68DN1 1984 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 C16orf96A6NNT2 1141 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 PSMD11O00231 422 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 ULK1O75385 1050 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 PAPLNO95428 1278 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 NFATC1O95644 943 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 UQCRBP14927 111 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC6A2P23975 617 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC7A1P30825 629 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 GDF5P43026 501 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 ATXN3P54252 364 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 AP1S2P56377 157 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 HSPA14Q0VDF9 509 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 Q6ZVL8 140 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 DET1Q7L5Y6 550 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 TRIM46Q7Z4K8 759 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SPRED2Q7Z698 418 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 APLFQ8IW19 511 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 PROKR1Q8TCW9 393 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 MAGEB10Q96LZ2 347 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 VPS35Q96QK1 796 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SLC39A3Q9BRY0 314 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 YY1AP1Q9H869 796 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SCOCQ9UIL1 159 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 EIF3LQ9Y262 564 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 ATG2AQ2TAZ0 1938 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 GFYI3L273 518 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 CLDN9O95484 217 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 KRT6AP02538 564 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 PRNPP04156 253 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 KRT6BP04259 564 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 CAPNS1P04632 268 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 MMP12P39900 470 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 KRT6CP48668 564 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 AQP4P55087 323 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 BOP1Q14137 746 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 TLR1Q15399 786 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 CYP20A1Q6UW02 462 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 TECPR1Q7Z6L1 1165 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 OR2T34Q8NGX1 318 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 OR2T3Q8NH03 318 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 MCOLN3Q8TDD5 553 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 BPIFB1Q8TDL5 484 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SKA2Q8WVK7 121 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 ASZ1Q8WWH4 475 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 GATA6Q92908 595 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 SCAMP4Q969E2 229 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 TEX37Q96LM6 180 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 LRRC3BQ96PB8 259 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 FAM83CQ9BQN1 747 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 RIOK2Q9BVS4 552 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 EBF3Q9H4W6 596 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 ASIC5Q9NY37 505 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 KLQ9UEF7 1012 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 CCL27Q9Y4X3 112 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 PCDHA9Q9Y5H5 950 aa17.91■□□□□ 0.46
PDLIM7-203ENST00000359895 KIAA1549LQ6ZVL6 1849 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 AQP12BA6NM10 295 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 LOC730098B7Z3J9 87 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 C9JVG2 144 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 ARNTLO00327 626 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 MANBAO00462 879 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 TULP3O75386 442 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 SMNDC1O75940 238 aaKnown RBP eCLIP17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 PCSK2P16519 638 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 ETV3P41162 512 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 EEFSECP57772 596 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 MED21Q13503 144 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 GGTA1PQ4G0N0 100 aa17.9■□□□□ 0.46
PDLIM7-203ENST00000359895 IL23RQ5VWK5 629 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms