RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ATXN3P54252 364 aaPredicted RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 SF3A2Q15428 464 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 UAP1L1Q3KQV9 507 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 LRRC8EQ6NSJ5 796 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 IYDQ6PHW0 289 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 OGFOD3Q6PK18 319 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 RASGRP3Q8IV61 690 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 MINDY1Q8N5J2 469 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 FAM46DQ8NEK8 389 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 ZBTB9Q96C00 473 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 SH3GL2Q99962 352 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 RTKNQ9BST9 563 aa12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 GTPBP2Q9BX10 602 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 DNAAF2Q9NVR5 837 aaKnown RBP12.13□□□□□ -0.47
NIF3L1-201ENST00000359683 DCDC2BA2VCK2 349 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 CDX4O14627 284 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 SNX2O60749 519 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 MATN4O95460 622 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 ANXA6P08133 673 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 CCDC166P0CW27 439 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 PYGBP11216 843 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 COL6A2P12110 1019 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 F3P13726 295 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 GMPRP36959 345 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 IL9RQ01113 521 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC18A2Q05940 514 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 DLG1Q12959 904 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 CLCA4Q14CN2 919 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 TAF1BQ53T94 588 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 DBX2Q6ZNG2 339 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 PRR23CQ6ZRP0 262 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 CLEC14AQ86T13 490 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 PDZD3Q86UT5 571 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 RMDN2Q96LZ7 410 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 DERL2Q9GZP9 239 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 WWP1Q9H0M0 922 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 VPS11Q9H270 941 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 IGSF5Q9NSI5 407 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 SCHIP1Q9P0W5 487 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 PSMD13Q9UNM6 376 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 PCDHGB2Q9Y5G2 931 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 ARID1BQ8NFD5 2236 aaPredicted RBP12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 LAMA1P25391 3075 aa12.12□□□□□ -0.47
NIF3L1-201ENST00000359683 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 GOLGA6L10A6NI86 522 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 OR5K4A6NMS3 321 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 PDZK1P1A8MUH7 402 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 GFYI3L273 518 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 OPA1O60313 960 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 KLHL2O95198 593 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 LTA4HP09960 611 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC35G4P0C7Q5 338 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 CD1DP15813 335 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 CCNFP41002 786 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 IRF9Q00978 393 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ABRQ12979 859 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 CSHL1Q14406 222 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 RPE65Q16518 533 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 PIWIL4Q7Z3Z4 852 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 TBC1D1Q86TI0 1168 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 C17orf82Q86X59 251 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 GATAD2AQ86YP4 633 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 CENPLQ8N0S6 344 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 NAGSQ8N159 534 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 PLD6Q8N2A8 252 aaKnown RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 NETO1Q8TDF5 533 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ZDHHC1Q8WTX9 485 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ASB11Q8WXH4 323 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 NXNL1Q96CM4 212 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 GPR78Q96P69 363 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 CENPHQ9H3R5 247 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 GOLGA8RI6L899 631 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 IFRD1O00458 451 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 FOXD2O60548 495 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 SLC2A4P14672 509 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 XRCC1P18887 633 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 KRT4P19013 534 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 HALP42357 657 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ATP6V0D1P61421 351 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 DEFB133Q30KQ1 61 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 AGBL2Q5U5Z8 902 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 EXOC3L1Q86VI1 746 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 LCA5Q86VQ0 697 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 MYO1HQ8N1T3 1032 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 SPATA6LQ8N4H0 392 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 KCTD4Q8WVF5 259 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 TLCD1Q96CP7 247 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 ACBD3Q9H3P7 528 aa12.11□□□□□ -0.47
NIF3L1-201ENST00000359683 NMRAL1Q9HBL8 299 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms