RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CPEB1Q9BZB8 566 aaKnown RBP5□□□□□ -1.61
ATXN3-202ENST00000359366 TUBB1Q9H4B7 451 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 TFB2MQ9H5Q4 396 aaKnown RBP5□□□□□ -1.61
ATXN3-202ENST00000359366 ATAD3AQ9NVI7 634 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 KLHL42Q9P2K6 505 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 NKX1-2Q9UD57 310 aaPredicted RBP5□□□□□ -1.61
ATXN3-202ENST00000359366 DPP7Q9UHL4 492 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 ZMYM5Q9UJ78 669 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 ZNF225Q9UK10 706 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 APPL1Q9UKG1 709 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 RPL26L1Q9UNX3 145 aaKnown RBP5□□□□□ -1.61
ATXN3-202ENST00000359366 DHRS7Q9Y394 339 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 DNAJC15Q9Y5T4 150 aa5□□□□□ -1.61
ATXN3-202ENST00000359366 NUP214P35658 2090 aaPredicted RBP5□□□□□ -1.61
ATXN3-202ENST00000359366 ZFC3H1O60293 1989 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TRBV5-4A0A0C4DH59 114 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LINC00854A0A1B0GVQ3 168 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 F8W8V4 182 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 STX16-NPEPL1H3BU86 382 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PIP5K1BO14986 540 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SCAMP1O15126 338 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 AXIN1O15169 862 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 NPHS1O60500 1241 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 NFATC1O95644 943 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ELFN1P0C7U0 828 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TCF3P15923 654 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CALB2P22676 271 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 VIPR1P32241 457 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PREPP48147 710 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CTSCP53634 463 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ASPHQ12797 758 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 KLF10Q13118 480 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 RUNX3Q13761 415 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 GRB7Q14451 532 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 KPNB1Q14974 876 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 C2orf27AQ580R0 203 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 HABP4Q5JVS0 413 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TXNDC11Q6PKC3 985 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SBSNQ6UWP8 590 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SYVN1Q86TM6 617 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 YAF2Q8IY57 180 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ZBTB2Q8N680 514 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CDYL2Q8N8U2 506 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TERB1Q8NA31 727 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 HIPK4Q8NE63 616 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 HMGCLL1Q8TB92 370 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 MCUR1Q96AQ8 359 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PYCR2Q96C36 320 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 OTUB2Q96DC9 234 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 HIC2Q96JB3 615 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LYSMD1Q96S90 227 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 NRTNQ99748 197 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 EGFL8Q99944 293 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 UQCC2Q9BRT2 126 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 HGH1Q9BTY7 390 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TMUB1Q9BVT8 246 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 FAM83DQ9H4H8 585 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 DENND2DQ9H6A0 471 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SYTL2Q9HCH5 934 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PDP2Q9P2J9 529 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TAGLN3Q9UI15 199 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 GNPTGQ9UJJ9 305 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CDH7Q9ULB5 785 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 COPG1Q9Y678 874 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TICRRQ7Z2Z1 1910 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 RGSL1A5PLK6 1076 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 FFAR3O14843 346 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PFDN6O15212 129 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 GPR42O15529 346 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CCNT2O60583 730 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 OR4F21O95013 312 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 KAT7O95251 611 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ALDOCP09972 364 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 COX4I1P13073 169 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LAMP2P13473 410 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CD9P21926 228 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 IGFBP4P22692 258 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PIK3R1P27986 724 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 PGM1P36871 562 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 MMP12P39900 470 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SKIV2L2P42285 1042 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 CLCQ05315 142 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 DMC1Q14565 340 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 AAK1Q2M2I8 961 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 HNRNPA1L2Q32P51 320 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 UGT3A2Q3SY77 523 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TMEM259Q4ZIN3 620 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SGO1Q5FBB7 561 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TMEM31Q5JXX7 168 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LETMD1Q6P1Q0 360 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 FBXL19Q6PCT2 694 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 TUBA3EQ6PEY2 450 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 BRAT1Q6PJG6 821 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LAYNQ6UX15 382 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 LIPIQ6XZB0 460 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 ACAD11Q709F0 780 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 RTL10Q7L3V2 364 aa4.99□□□□□ -1.61
ATXN3-202ENST00000359366 RAB44Q7Z6P3 723 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 METTL3Q86U44 580 aaKnown RBP4.99□□□□□ -1.61
ATXN3-202ENST00000359366 SLC22A9Q8IVM8 553 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms