RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FUBP1Q96AE4 644 aaKnown RBP6.46□□□□□ -1.37
CSDE1-203ENST00000358528 HIST1H2AHQ96KK5 128 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 BTN2A3PQ96KV6 586 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 PPP3R2Q96LZ3 170 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 HIST1H2AJQ99878 128 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 H2AFJQ9BTM1 129 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 SMOC2Q9H3U7 446 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 REEP1Q9H902 201 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 LRTM1Q9HBL6 345 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 MRM3Q9HC36 420 aaKnown RBP6.46□□□□□ -1.37
CSDE1-203ENST00000358528 MAGEE1Q9HCI5 957 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 SH3BP4Q9P0V3 963 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF451Q9Y4E5 1061 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 ASB1Q9Y576 335 aa6.46□□□□□ -1.37
CSDE1-203ENST00000358528 LCHNA4D1U4 455 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 SLC1A7O00341 560 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 EEDO75530 441 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 SLC25A14O95258 325 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 F2P00734 622 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 UGT2B4P06133 528 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 CHRM5P08912 532 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 ALPIP09923 528 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 POU2F1P14859 743 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 HRH2P25021 359 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 HTR1BP28222 390 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 GTF2E2P29084 291 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 GNPDA1P46926 289 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 SLC11A2P49281 568 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 EPS8Q12929 822 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 DUSP4Q13115 394 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 PWP1Q13610 501 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RAPSNQ13702 412 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RCAN2Q14206 197 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 NFE2Q16621 373 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 SMN1Q16637 294 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RBM48Q5RL73 367 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 CES5AQ6NT32 575 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TXNDC11Q6PKC3 985 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 DSG4Q86SJ6 1040 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 PIANPQ8IYJ0 282 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 PROKR1Q8TCW9 393 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RPL3LQ92901 407 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 PANX1Q96RD7 426 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 ATOH8Q96SQ7 321 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 PARK7Q99497 189 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 CHCHD6Q9BRQ6 235 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TSEN34Q9BSV6 310 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 FAM126AQ9BYI3 521 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 MUC13Q9H3R2 512 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RMND5AQ9H871 391 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 ACOX3O15254 700 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RGS10O43665 173 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 GLUD1P00367 558 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 KRT6AP02538 564 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 KRT6BP04259 564 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 MTHFD2P13995 350 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 EPB42P16452 691 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 ITPKAP23677 461 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 CRHBPP24387 322 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 AZGP1P25311 298 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 HTR1EP28566 365 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RPL9P32969 192 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 IDUAP35475 653 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 KRT6CP48668 564 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 IL10RBQ08334 325 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TUSC3Q13454 348 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TOP3AQ13472 1001 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 ATXN7L2Q5T6C5 722 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 RNF219Q5W0B1 726 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 FAM117BQ6P1L5 589 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 GOLGA7Q7Z5G4 137 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 SPRED1Q7Z699 444 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TAGAPQ8N103 731 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 SCML4Q8N228 414 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TTC29Q8NA56 475 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 S100ZQ8WXG8 99 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 PGAP3Q96FM1 320 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 TDRD1Q9BXT4 1180 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 CEP44Q9C0F1 390 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 MAF1Q9H063 256 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
CSDE1-203ENST00000358528 ZFP37Q9Y6Q3 630 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 POLR2AP24928 1970 aaKnown RBP6.46□□□□□ -1.38
CSDE1-203ENST00000358528 EFCAB9A8MZ26 197 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PER2O15055 1255 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MUSKO15146 869 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 FFAR2O15552 330 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MGEA5O60502 916 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CREG1O75629 220 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CAPN15O75808 1086 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MATN4O95460 622 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MT-ND2P03891 347 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CYP11A1P05108 521 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PGRP06401 933 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GSTT2P0CG29 244 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 GSTT2BP0CG30 244 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF7P17097 686 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TACR2P21452 398 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TGFBR1P36897 503 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms