RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DTNBP1Q96EV8 351 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 SLC39A3Q9BRY0 314 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 RPP25Q9BUL9 199 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ANKRD60Q9BZ19 345 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 BRINP2Q9C0B6 783 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ASB8Q9H765 288 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PNPLA3Q9NST1 481 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 KIAA1522Q9P206 1035 aaPredicted RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 APPL1Q9UKG1 709 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 CLEC4EQ9ULY5 219 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 KANSL1LA0AUZ9 987 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 DHRS12A0PJE2 317 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 EEDO75530 441 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 S100BP04271 92 aaPredicted RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 SLC6A2P23975 617 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 FCARP24071 287 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PSMA4P25789 261 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 GKP32189 559 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 CD70P32970 193 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 CA5AP35218 305 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 HNF1BP35680 557 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 GRIA3P42263 894 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 KCNK10P57789 538 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PCBP2Q15366 365 aaKnown RBP eCLIP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 CDKN3Q16667 212 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 NADK2Q4G0N4 442 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 AP1ARQ63HQ0 302 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 B3GNT6Q6ZMB0 384 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PRR23BQ6ZRT6 265 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ZBTB49Q6ZSB9 765 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 METTL3Q86U44 580 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 FIBINQ8TAL6 211 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 HM13Q8TCT9 377 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PPWD1Q96BP3 646 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 CCDC97Q96F63 343 aaPredicted RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ASB16Q96NS5 453 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PRPF18Q99633 342 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 KXD1Q9BQD3 176 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 RBM38Q9H0Z9 239 aaKnown RBP14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 SEMA6AQ9H2E6 1030 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ATP13A3Q9H7F0 1226 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ABCB8Q9NUT2 735 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ZIM2Q9NZV7 527 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 PCDHA9Q9Y5H5 950 aa14.04□□□□□ -0.16
NIPAL3-203ENST00000358028 ZNF318Q5VUA4 2279 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TRBV5-4A0A0C4DH59 114 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 C9JVG2 144 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 VILLO15195 856 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 CLDN7O95471 211 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 H6PDO95479 791 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 DIO3P55073 304 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 EEFSECP57772 596 aaKnown RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 ERVK-8P63133 956 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TUBA4AP68366 448 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 NFATC2Q13469 925 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 NRF1Q16656 503 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 PLEKHG6Q3KR16 790 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 LYPLAL1Q5VWZ2 237 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 IYDQ6PHW0 289 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 SCIMPQ6UWF3 145 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 SBSNQ6UWP8 590 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 RBM44Q6ZP01 1051 aaKnown RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TPGS1Q6ZTW0 290 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 PTRH1Q86Y79 214 aaKnown RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 HOMEZQ8IX15 550 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 OR2T11Q8NH01 316 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 LKAAEAR1Q8TD35 194 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 CANT1Q8WVQ1 401 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 BOCQ9BWV1 1114 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 CIPCQ9C0C6 399 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TNKS2Q9H2K2 1166 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 NOL11Q9H8H0 719 aaKnown RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 IL1RL2Q9HB29 575 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 IL26Q9NPH9 171 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TSR3Q9UJK0 312 aaKnown RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 LEF1Q9UJU2 399 aaPredicted RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 RNF11Q9Y3C5 154 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 TNPO3Q9Y5L0 923 aaKnown RBP14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 PRSS21Q9Y6M0 314 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 COL4A2P08572 1712 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 MUC6Q6W4X9 2439 aa14.03□□□□□ -0.16
NIPAL3-203ENST00000358028 GLYATL1P3A0A0U1RQE8 302 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 RAD51BO15315 384 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 AKAP10O43572 662 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 ZNF821O75541 412 aaPredicted RBP14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 UMPSP11172 480 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 BPIP17213 487 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 ITGB6P18564 788 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 ACRV1P26436 265 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 SPAM1P38567 509 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 RGS4P49798 205 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 ERVPABLB-1P60509 514 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 PRKCQQ04759 706 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 GK3PQ14409 553 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 C18orf21Q32NC0 220 aaPredicted RBP14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 AASDHQ4L235 1098 aaPredicted RBP14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 ARHGAP15Q53QZ3 475 aa14.02□□□□□ -0.16
NIPAL3-203ENST00000358028 PITRM1Q5JRX3 1037 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms