RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 S100A5P33763 92 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 RPL38P63173 70 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 SLC35A2P78381 396 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 IFITM2Q01629 132 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PTGR1Q14914 329 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PON2Q15165 354 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PTPRNQ16849 979 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 FAM174BQ3ZCQ3 159 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.55□□□□□ -1.2
CD46-204ENST00000357714 SYT6Q5T7P8 510 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 PPP2R2DQ66LE6 453 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 TAPT1Q6NXT6 567 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 TMC5Q6UXY8 1006 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 AHSA2Q719I0 299 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 HEATR4Q86WZ0 1026 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 GPSM1Q86YR5 675 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PHACTR4Q8IZ21 702 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ELMO1Q92556 727 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 REXO5Q96IC2 774 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 APOL4Q9BPW4 351 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 IKZF5Q9H5V7 419 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ATP13A1Q9HD20 1204 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PIM2Q9P1W9 311 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ASB1Q9Y576 335 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 HS3ST4Q9Y661 456 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 BPTFQ12830 3046 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 MCM3APO60318 1980 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 A0A0G2JMZ2 1700 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 LRRC37A2A6NM11 1700 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 GRXCR2A6NFK2 248 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ARVCFO00192 962 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 STX16O14662 325 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PTGESO14684 152 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 AIREO43918 545 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 KCNK2O95069 426 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ZNF682O95780 498 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 APOA1P02647 267 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 CNPP09543 421 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 CD6P30203 668 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 MRPL19P49406 292 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 SUOXP51687 545 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 HUNKP57058 714 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ERVPABLB-1P60509 514 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 MRPS15P82914 257 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 CDC42EP1Q00587 391 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 IHHQ14623 411 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PLEKHG6Q3KR16 790 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 RFTN2Q52LD8 501 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 CCBE1Q6UXH8 406 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 USP43Q70EL4 1123 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 FKBP9P1Q75LS8 142 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 LACC1Q8IV20 430 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ATL1Q8WXF7 558 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 CCDC115Q96NT0 180 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 SH3GL1Q99961 368 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 DUSP21Q9H596 190 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ACOT13Q9NPJ3 140 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 IL37Q9NZH6 218 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 TMEFF2Q9UIK5 374 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 ZMYM5Q9UJ78 669 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 FBXO10Q9UK96 956 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 M0QX08 132 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 CREG1O75629 220 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 GJB3O75712 270 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 RECQL5O94762 991 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 MMP2P08253 660 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ATXN1LP0C7T5 689 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 ITGB6P18564 788 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 HOXC13P31276 330 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 CLCNKBP51801 687 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PHC1P78364 1004 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ZNF181Q2M3W8 571 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 GTDC1Q4AE62 458 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 VARS2Q5ST30 1063 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 LETMD1Q6P1Q0 360 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 TMEM86AQ8N2M4 240 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 NKAPQ8N5F7 415 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 FAM83FQ8NEG4 500 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 ZNF566Q969W8 418 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 RHBDF1Q96CC6 855 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 FAM120BQ96EK7 910 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 SPATA17Q96L03 361 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 TRIM62Q9BVG3 475 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 DPY30Q9C005 99 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 REXO4Q9GZR2 422 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 MMP27Q9H306 513 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ACTL8Q9H568 366 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 ZBTB20Q9HC78 741 aaPredicted RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 ZFP14Q9HCL3 533 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 CCNB1IP1Q9NPC3 277 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 PRDM8Q9NQV8 689 aa7.55□□□□□ -1.2
CD46-204ENST00000357714 TRMT6Q9UJA5 497 aaKnown RBP7.55□□□□□ -1.2
CD46-204ENST00000357714 LOC100506127A0A0U1RQW1 187 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 CASTOR2A6NHX0 329 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 RRN3P2A6NIE6 340 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
CD46-204ENST00000357714 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms