RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CDX4O14627 284 aaPredicted RBP24.8■■□□□ 1.56
SSBP3-202ENST00000357475 CBSLP0DN79 551 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 CD1DP15813 335 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 CBSP35520 551 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 UAP1L1Q3KQV9 507 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 ABRAXAS1Q6UWZ7 409 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 CDHR3Q6ZTQ4 885 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 ASCL5Q7RTU5 278 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 CROCCP2Q86T23 111 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 TBC1D1Q86TI0 1168 aaPredicted RBP24.8■■□□□ 1.56
SSBP3-202ENST00000357475 NKAPQ8N5F7 415 aaKnown RBP24.8■■□□□ 1.56
SSBP3-202ENST00000357475 PHC3Q8NDX5 983 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 DLG3Q92796 817 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 PTERQ96BW5 349 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 GPR78Q96P69 363 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 SIRPGQ9P1W8 387 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 NOVA2Q9UNW9 492 aaKnown RBP24.8■■□□□ 1.56
SSBP3-202ENST00000357475 DOLKQ9UPQ8 538 aa24.8■■□□□ 1.56
SSBP3-202ENST00000357475 NPEPPSL1A6NEC2 478 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 ZBTB14O43829 449 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 DFNA5O60443 496 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 SYF2O95926 243 aaKnown RBP24.79■■□□□ 1.56
SSBP3-202ENST00000357475 ANXA6P08133 673 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 F3P13726 295 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 ATP5DP30049 168 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 GLRBP48167 497 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 RGS4P49798 205 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 ATXN3P54252 364 aaPredicted RBP24.79■■□□□ 1.56
SSBP3-202ENST00000357475 RPE65Q16518 533 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 CSRP2Q16527 193 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 AGAP9Q5VTM2 703 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 WASH2PQ6VEQ5 465 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 ZDHHC1Q8WTX9 485 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 PDLIM5Q96HC4 596 aaKnown RBP24.79■■□□□ 1.56
SSBP3-202ENST00000357475 C12orf66Q96MD2 445 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 DERL2Q9GZP9 239 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 C12orf65Q9H3J6 166 aaKnown RBP24.79■■□□□ 1.56
SSBP3-202ENST00000357475 WASH6PQ9NQA3 447 aa24.79■■□□□ 1.56
SSBP3-202ENST00000357475 ZNF624Q9P2J8 865 aaPredicted RBP24.79■■□□□ 1.56
SSBP3-202ENST00000357475 GOLGA6L10A6NI86 522 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 MATN4O95460 622 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 LTA4HP09960 611 aaKnown RBP24.78■■□□□ 1.56
SSBP3-202ENST00000357475 MPC1LP0DKB6 136 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 MYF5P13349 255 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 ENO3P13929 434 aaPredicted RBP24.78■■□□□ 1.56
SSBP3-202ENST00000357475 PLOD1Q02809 727 aaPredicted RBP24.78■■□□□ 1.56
SSBP3-202ENST00000357475 SLC18A2Q05940 514 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 IYDQ6PHW0 289 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 MYO1HQ8N1T3 1032 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 ACMSDQ8TDX5 336 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 TLCD1Q96CP7 247 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 NRTNQ99748 197 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 IMP3Q9NV31 184 aaKnown RBP24.78■■□□□ 1.56
SSBP3-202ENST00000357475 CIDEBQ9UHD4 219 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 CSNK1G3Q9Y6M4 447 aa24.78■■□□□ 1.56
SSBP3-202ENST00000357475 BTN3A1O00481 513 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 TRIM38O00635 465 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 SPAG7O75391 227 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 KLHL2O95198 593 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 BDKRB1P46663 353 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 OR4D1Q15615 310 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 TSNQ15631 228 aaKnown RBP24.77■■□□□ 1.56
SSBP3-202ENST00000357475 NEK10Q6ZWH5 1172 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 RASGRP3Q8IV61 690 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 OR5AR1Q8NGP9 310 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 TFGQ92734 400 aaPredicted RBP24.77■■□□□ 1.56
SSBP3-202ENST00000357475 EDEM2Q9BV94 578 aa24.77■■□□□ 1.56
SSBP3-202ENST00000357475 EP300Q09472 2414 aaPredicted RBP24.77■■□□□ 1.56
SSBP3-202ENST00000357475 ZFHX2Q9C0A1 2572 aaPredicted RBP24.77■■□□□ 1.56
SSBP3-202ENST00000357475 EIF3FO00303 357 aaPredicted RBP24.76■■□□□ 1.55
SSBP3-202ENST00000357475 NOBOXO60393 691 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 SLC19A1P41440 591 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 KCNC1P48547 511 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 MAZP56270 477 aaKnown RBP24.76■■□□□ 1.55
SSBP3-202ENST00000357475 CCSMST1Q4G0I0 132 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 C16orf46Q6P387 395 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 PRR23CQ6ZRP0 262 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 SLC37A2Q8TED4 501 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 ASB11Q8WXH4 323 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 DNAAF2Q9NVR5 837 aaKnown RBP24.76■■□□□ 1.55
SSBP3-202ENST00000357475 BTBD3Q9Y2F9 522 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 YKT6O15498 198 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 LRP3O75074 770 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 MTHFD1P11586 935 aaKnown RBP24.76■■□□□ 1.55
SSBP3-202ENST00000357475 SLC26A3P40879 764 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 MAGOHP61326 146 aaKnown RBP24.76■■□□□ 1.55
SSBP3-202ENST00000357475 PHKG1Q16816 387 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.76■■□□□ 1.55
SSBP3-202ENST00000357475 SBSNQ6UWP8 590 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 ISCA2Q86U28 154 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 BANPQ8N9N5 519 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 KYQ8NBH2 561 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 CABS1Q96KC9 395 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 ALG9Q9H6U8 611 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 TMEM216Q9P0N5 145 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 ASF1AQ9Y294 204 aa24.76■■□□□ 1.55
SSBP3-202ENST00000357475 ARHGEF33A8MVX0 844 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 GFYI3L273 518 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 IFRD1O00458 451 aaPredicted RBP24.75■■□□□ 1.55
SSBP3-202ENST00000357475 PCDHGA12O60330 932 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms