RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 GLUD2P49448 558 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 CDH13P55290 713 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 ZNF45Q02386 682 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 SLC44A3Q8N4M1 653 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 ASB9Q96DX5 294 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 FXYD6Q9H0Q3 95 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 RANBP3Q9H6Z4 567 aaPredicted RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 FARSAQ9Y285 508 aaKnown RBP12.67□□□□□ -0.38
SMC4-202ENST00000357388 ZNF451Q9Y4E5 1061 aa12.67□□□□□ -0.38
SMC4-202ENST00000357388 DAPL1A0PJW8 107 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 M0R233 179 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 TOR1BO14657 336 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 MATKP42679 507 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 MARCKSL1P49006 195 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 GSCP56915 257 aaPredicted RBP12.66□□□□□ -0.38
SMC4-202ENST00000357388 RPP38P78345 283 aaKnown RBP12.66□□□□□ -0.38
SMC4-202ENST00000357388 NPTX1Q15818 432 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 GLOD4Q9HC38 313 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 MAGEB17A8MXT2 336 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 VIPP01282 170 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 IDSP22304 550 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 CSTF2P33240 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMC4-202ENST00000357388 CLCQ05315 142 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 FOXM1Q08050 763 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 SLC9B1Q4ZJI4 515 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 STRADAQ7RTN6 431 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 MFSD14AQ96MC6 490 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 EDARQ9UNE0 448 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 WASF2Q9Y6W5 498 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 ANKRD63C9JTQ0 380 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 AGRPO00253 132 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 PER2O15055 1255 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 PET100P0DJ07 73 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 GSTM3P21266 225 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 MASP1P48740 699 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 CTBP2P56545 445 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 WNT3AP56704 352 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 GRK1Q15835 563 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 AMIGO1Q86WK6 493 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 C11orf16Q9NQ32 467 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 TMEM184CQ9NVA4 438 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 FAM234BA2RU67 622 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 ALPPL2P10696 532 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 NCK1P16333 377 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 ARL13AQ5H913 290 aaPredicted RBP12.66□□□□□ -0.38
SMC4-202ENST00000357388 SAMD14Q8IZD0 417 aaPredicted RBP12.66□□□□□ -0.38
SMC4-202ENST00000357388 CRYBG2Q8N1P7 616 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 ZBTB2Q8N680 514 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 TOP6BLQ8N6T0 577 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 KXD1Q9BQD3 176 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 IFT27Q9BW83 186 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 TM9SF3Q9HD45 589 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 IGSF9Q9P2J2 1179 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 COLEC10Q9Y6Z7 277 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 ASTN1O14525 1302 aa12.66□□□□□ -0.38
SMC4-202ENST00000357388 FAM86B1E9PN63 330 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 DLGAP1O14490 977 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 STK16O75716 305 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 ARL6IP5O75915 188 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 GOT1P17174 413 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 HTR2AP28223 471 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 MAGEA8P43361 318 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 MON1AQ86VX9 555 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 BPIFB1Q8TDL5 484 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 ITPKCQ96DU7 683 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 SLC30A2Q9BRI3 323 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 TTPALQ9BTX7 342 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 GLS2Q9UI32 602 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 ERVW-1Q9UQF0 538 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 POFUT2Q9Y2G5 429 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 ROBO3Q96MS0 1386 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 CLCA1A8K7I4 914 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 CAPN15O75808 1086 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 COL6A1P12109 1028 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 GABRR2P28476 465 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 DNAJA1P31689 397 aaKnown RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 KHKP50053 298 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 VSIG10LQ86VR7 867 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 SLC43A3Q8NBI5 491 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 OR10H4Q8NGA5 316 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 OR5J2Q8NH18 312 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 ERLEC1Q96DZ1 483 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 METTL8Q9H825 291 aaKnown RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 CMAHPQ9Y471 501 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 TLR5O60602 858 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 PENKP01210 267 aaPredicted RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 ZNF14P17017 642 aaPredicted RBP12.65□□□□□ -0.38
SMC4-202ENST00000357388 PGDP52209 483 aa12.65□□□□□ -0.38
SMC4-202ENST00000357388 ZNF404Q494X3 552 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms