RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TBPL2Q6SJ96 375 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 CYHR1Q6ZMK1 362 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SPARTQ8N0X7 666 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 KLHDC9Q8NEP7 349 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 TRIM63Q969Q1 353 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 TSPAN17Q96FV3 270 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 IMP4Q96G21 291 aaKnown RBP9.23□□□□□ -0.93
SMG6-202ENST00000354901 SERPINB11Q96P15 392 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 SLC25A23Q9BV35 468 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 KCNN3Q9UGI6 736 aa9.23□□□□□ -0.93
SMG6-202ENST00000354901 MIA3Q5JRA6 1907 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SLC12A8A0AV02 714 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 RGS13O14921 159 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SH3BP5O60239 455 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 AKR1A1P14550 325 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 OR1E1P30953 314 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 DNAJB13P59910 316 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 NKX3-2P78367 333 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 BNIP2Q12982 314 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SEMA3AQ14563 771 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ACAP2Q15057 778 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MAPRE2Q15555 327 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 TAB1Q15750 504 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ADPRMQ3LIE5 342 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 CYBRD1Q53TN4 286 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ZNF678Q5SXM1 525 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 NXNL2Q5VZ03 156 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ANKRD34AQ69YU3 496 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SULT1C3Q6IMI6 304 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SYCE2Q6PIF2 218 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 LYSMD2Q8IV50 215 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 FUNDC1Q8IVP5 155 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 PGBD5Q8N414 524 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MFSD4AQ8N468 514 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ANKFN1Q8N957 763 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MINDY2Q8NBR6 621 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 TRPV1Q8NER1 839 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MYEOVQ96EZ4 313 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 HBEGFQ99075 208 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ASPSCR1Q9BZE9 553 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ZYG11BQ9C0D3 744 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MKRN2Q9H000 416 aaKnown RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 MEAF6Q9HAF1 191 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SARS2Q9NP81 518 aaKnown RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 C8orf4Q9NR00 106 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 DNAJC15Q9Y5T4 150 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 NYNRINQ9P2P1 1898 aaKnown RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 H3BMM5 538 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 TNFRSF10BO14763 440 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MUSKO15146 869 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SLC22A2O15244 555 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ABCB7O75027 752 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SEC14L2O76054 403 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 GLP2RO95838 553 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 PEX11BO96011 259 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 MMP2P08253 660 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 IMPDH1P20839 514 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ETV3P41162 512 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 OR3A3P47888 321 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 APLP1P51693 650 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ZNF235Q14590 738 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 PTPRRQ15256 657 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 OR4D1Q15615 310 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SYT16Q17RD7 645 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 C6orf10Q5SRN2 563 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ZNF549Q6P9A3 640 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 GLB1L3Q8NCI6 653 aaPredicted RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 RORBQ92753 470 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 CCDC126Q96EE4 140 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 UBXN10Q96LJ8 280 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 FYTTD1Q96QD9 318 aaKnown RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 DSN1Q9H410 356 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ACTR3BQ9P1U1 418 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 VPS28Q9UK41 221 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 PCDHB3Q9Y5E6 796 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 HTTP42858 3142 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 CA12O43570 354 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SCO2O43819 266 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 RAMP2O60895 175 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 PRKD3O94806 890 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 CDK14O94921 469 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 LDLRP01130 860 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 KRT6AP02538 564 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 DNTTP04053 509 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 KRT6BP04259 564 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 CYP4B1P13584 511 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 HGFP14210 728 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 FOSL1P15407 271 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 FCGRTP55899 365 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ZNF33AQ06730 810 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 RFTN1Q14699 578 aaPredicted RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 CDK10Q15131 360 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 XAF1Q6GPH4 301 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 SLC22A9Q8IVM8 553 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 HS3ST5Q8IZT8 346 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 TWIST2Q8WVJ9 160 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 ZHX1-C8orf76Q96EF9 292 aa9.22□□□□□ -0.93
SMG6-202ENST00000354901 CENPNQ96H22 339 aaPredicted RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 SEPT5Q99719 369 aaPredicted RBP9.22□□□□□ -0.93
SMG6-202ENST00000354901 SMURF2Q9HAU4 748 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms