RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 HEPACAMQ14CZ8 416 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 ANGPT1Q15389 498 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RFTN2Q52LD8 501 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RAB6CQ53S08 254 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RNFT2Q96EX2 444 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RAB6CQ9H0N0 254 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 OXSMQ9NWU1 459 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 KCNK6Q9Y257 313 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 FAM25AB3EWG3 89 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 FAM25CB3EWG5 89 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 FAM25GB3EWG6 89 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 KCNA5P22460 613 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RPL26P61254 145 aaKnown RBP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 DNASE1L2Q92874 299 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 TSGA13Q96PP4 275 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 SLC38A2Q96QD8 506 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RPL26L1Q9UNX3 145 aaKnown RBP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 CPED1A4D0V7 1026 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 CDC7O00311 574 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 KERAO60938 352 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 TCEA3O75764 348 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 DEFB103AP81534 67 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 DGCR6Q14129 220 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 SLBPQ14493 270 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF783Q6ZMS7 281 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 FAM43BQ6ZT52 329 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 Q6ZVL8 140 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 BEND5Q7L4P6 421 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 UMODL1-AS1Q8N2C9 162 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 SMARCD2Q92925 531 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 RUVBL1Q9Y265 456 aaKnown RBP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 A8MT66 165 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 TIPRLO75663 272 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 OR6B1O95007 311 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 PGLSO95336 258 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 ADH1BP00325 375 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 JAK1P23458 1154 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 HSD17B2P37059 387 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 HNMTP50135 292 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 XKR4Q5GH76 650 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 CILP2Q8IUL8 1156 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 CNTD1Q8N815 330 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 TMEM145Q8NBT3 493 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 KIFC1Q9BW19 673 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 GMEB2Q9UKD1 530 aa14.64□□□□□ -0.07
COL17A1-201ENST00000353479 CAB39Q9Y376 341 aaPredicted RBP14.64□□□□□ -0.07
COL17A1-201ENST00000353479 B3GALT2O43825 422 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 VIPR2P41587 438 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CCR8P51685 355 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 STC1P52823 247 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 RPS14P62263 151 aaKnown RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 LIPEQ05469 1076 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 NFATC2Q13469 925 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 INAQ16352 499 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 GPRC6AQ5T6X5 926 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 POMZP3Q6PJE2 187 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 MTERF3Q96E29 417 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 ITM2CQ9NQX7 267 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CLN6Q9NWW5 311 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 DCLK1O15075 740 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CPN2P22792 545 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 FOXN2P32314 431 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CREB5Q02930 508 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 PRAMEF14Q5SWL7 426 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 PRAMEF13Q5VWM6 474 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 KHDRBS2Q5VWX1 349 aaKnown RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 ERICH5Q6P6B1 374 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 DPY19L3Q6ZPD9 716 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CLVS1Q8IUQ0 354 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 TUBGCP5Q96RT8 1024 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 USP29Q9HBJ7 922 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 NLE1Q9NVX2 485 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CDH22Q9UJ99 828 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 PPM1HQ9ULR3 514 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 ELOVL7A1L3X0 281 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 UGT2B17O75795 530 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 SLC13A2Q13183 592 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 DEPDC7Q96QD5 511 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CYP4B1P13584 511 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF37AP17032 561 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 FAM174BQ3ZCQ3 159 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 TRIM74Q86UV6 250 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 SLC22A18Q96BI1 424 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 SIGLEC10Q96LC7 697 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 SLC22A14Q9Y267 594 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 A0A087WXM4 84 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 ERN1O75460 977 aaKnown RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 WDR4P57081 412 aaKnown RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 WDR5P61964 334 aaKnown RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CSNK2BP67870 215 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 SLC10A2Q12908 348 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 NR1D2Q14995 579 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 MTX3Q5HYI7 312 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 FBXO15Q8NCQ5 510 aaPredicted RBP14.63□□□□□ -0.07
COL17A1-201ENST00000353479 CNPPD1Q9BV87 410 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 GJD2Q9UKL4 321 aa14.63□□□□□ -0.07
COL17A1-201ENST00000353479 ANKRD36CQ5JPF3 1778 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 LRRC14BA6NHZ5 514 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 KRT33AO76009 404 aa14.62□□□□□ -0.07
COL17A1-201ENST00000353479 ITGAXP20702 1163 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms