RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 VITQ6UXI7 678 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 GALNT7Q86SF2 657 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 RBM12BQ8IXT5 1001 aaKnown RBP8.46□□□□□ -1.05
TRIM55-204ENST00000353317 CHST14Q8NCH0 376 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 DNAJB14Q8TBM8 379 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 MIPOL1Q8TD10 442 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 NXPE3Q969Y0 559 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 ACDQ96AP0 544 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 PPP1R14BQ96C90 147 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 TUBGCP3Q96CW5 907 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 MRGPRX3Q96LB0 322 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 TEX37Q96LM6 180 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 DOK1Q99704 481 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 FAM83CQ9BQN1 747 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 TRIM15Q9C019 465 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 NAA50Q9GZZ1 169 aaKnown RBP8.46□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF576Q9H609 170 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 ZDHHC4Q9NPG8 344 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 HPS4Q9NQG7 708 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 POLG2Q9UHN1 485 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 BTRCQ9Y297 605 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 PCDHB9Q9Y5E1 797 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 FADS3Q9Y5Q0 445 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 PIKFYVEQ9Y2I7 2098 aa8.46□□□□□ -1.05
TRIM55-204ENST00000353317 SOBPA7XYQ1 873 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 A8MX80 341 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 PRRT4C9JH25 899 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 H3BMM5 538 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 GIPC1O14908 333 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 PAPSS2O95340 614 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 MATN4O95460 622 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 MT-ND1P03886 318 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 CYBBP04839 570 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 NCK1P16333 377 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 CD247P20963 164 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 DCKP27707 260 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 YAP1P46937 504 aaKnown RBP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 ECT2LQ008S8 904 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 PTPRNQ16849 979 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 FBXO48Q5FWF7 155 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 TMTC4Q5T4D3 741 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 KANK2Q63ZY3 851 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 ABRAXAS1Q6UWZ7 409 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 TMEM26Q6ZUK4 368 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 EFHBQ8N7U6 833 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 GOLM1Q8NBJ4 401 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 MAGEE2Q8TD90 523 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 OSCP1Q8WVF1 389 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 PIH1D2Q8WWB5 315 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 FGF14Q92915 247 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 SMARCD2Q92925 531 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 TMEM125Q96AQ2 219 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 VPS33AQ96AX1 596 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 RMDN1Q96DB5 314 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 CCDC97Q96F63 343 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 MFSD1Q9H3U5 465 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 ALG2Q9H553 416 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 NSUN3Q9H649 340 aaKnown RBP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 POLR1BQ9H9Y6 1135 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 BPIFA1Q9NP55 256 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 MARK1Q9P0L2 795 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 HS3ST2Q9Y278 367 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 OAS3Q9Y6K5 1087 aaKnown RBP8.46□□□□□ -1.06
TRIM55-204ENST00000353317 DENND4AQ7Z401 1863 aa8.46□□□□□ -1.06
TRIM55-204ENST00000353317 KIAA1549LQ6ZVL6 1849 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TCRBV5S2A0A599 114 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ASPDHA6ND91 283 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TTC34A8MYJ7 566 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 SNAP29O95721 258 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 HLA-DPA1P20036 260 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 FDXRP22570 491 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 CES1P23141 567 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 GSK3BP49841 420 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 NAA20P61599 178 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PLCL1Q15111 1095 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PYCR3Q53H96 274 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 LRRC73Q5JTD7 316 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 AARS2Q5JTZ9 985 aaKnown RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PARM1Q6UWI2 310 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 XKR5Q6UX68 686 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 DPY19L3Q6ZPD9 716 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 KCTD8Q6ZWB6 473 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PATL1Q86TB9 770 aaKnown RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ETFBKMTQ8IXQ9 262 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 GABPB2Q8TAK5 448 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ZNF420Q8TAQ5 688 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 BPIFB1Q8TDL5 484 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 GIPC3Q8TF64 312 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 ERLEC1Q96DZ1 483 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 THAP11Q96EK4 314 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 PLEKHG4BQ96PX9 1271 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 CD320Q9NPF0 282 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 GID8Q9NWU2 228 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 SMPD3Q9NY59 655 aaPredicted RBP8.45□□□□□ -1.06
TRIM55-204ENST00000353317 SLAMF8Q9P0V8 285 aa8.45□□□□□ -1.06
TRIM55-204ENST00000353317 TBC1D14Q9P2M4 693 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms