RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 MECRQ9BV79 373 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PPIL3Q9H2H8 161 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 DPEP3Q9H4B8 488 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 COL20A1Q9P218 1284 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ARHGAP28Q9P2N2 729 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PPM1HQ9ULR3 514 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PADI2Q9Y2J8 665 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ALG5Q9Y673 324 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TRBV23OR9-2A0A075B6M9 112 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ATP6AP2A0A1C7CYW4 349 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 INPPL1O15357 1258 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 TXNL1O43396 289 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RP2O75695 350 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ATP6AP2O75787 350 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PTTG1O95997 202 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SELPP16109 830 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 FADDQ13158 208 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SEMA5AQ13591 1074 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GPAT3Q53EU6 434 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PAN3Q58A45 887 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GCNT7Q6ZNI0 430 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 IRF2BP2Q7Z5L9 587 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ZC3HC1Q86WB0 502 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LRRC52Q8N7C0 313 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 BRSK1Q8TDC3 778 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 ACTRT2Q8TDY3 377 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SYT17Q9BSW7 474 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 AKAP7Q9P0M2 348 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GNG8Q9UK08 70 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PDE10AQ9Y233 779 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 M0R036 132 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 OR10H2O60403 315 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 SBK2P0C263 348 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PAICSP22234 425 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CLCN5P51795 746 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 GPR85P60893 370 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 FKBP1BP68106 108 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CPSF6Q16630 551 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 VMACQ2NL98 169 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PTPN20Q4JDL3 420 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LRRC38Q5VT99 294 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 CFAP77Q6ZQR2 320 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 C7orf61Q8IZ16 206 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 LRTOMTQ8WZ04 291 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 RIT1Q92963 219 aa10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 PRICKLE1Q96MT3 831 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-202ENST00000348513 POLR1CO15160 346 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 LYPLA1O75608 230 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 OR6A2O95222 327 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SMPD1P17405 629 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 LPOP22079 712 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ITGA3P26006 1051 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PPM1AP35813 382 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 CDKN2CP42773 168 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 GRB14Q14449 540 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PROSER1Q86XN7 944 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ZNF655Q8N720 491 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 OR4L1Q8NH43 312 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 EEF1AKMT1Q8WVE0 214 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 P2RY11Q96G91 374 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 MIPEPQ99797 713 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PDZD7Q9H5P4 517 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PCYOX1Q9UHG3 505 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 HCN4Q9Y3Q4 1203 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 CLCA1A8K7I4 914 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 H3BUI4 141 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 DDX3YO15523 660 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PRAMEF1O95521 474 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 XRCC1P18887 633 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 RHBDF2Q6PJF5 856 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 APTXQ7Z2E3 356 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC15A3Q8IY34 581 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 C12orf57Q99622 126 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 C17orf62Q9BQA9 187 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 CRISPLD1Q9H336 500 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PNO1Q9NRX1 252 aaKnown RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 TAS2R9Q9NYW1 312 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ASF1AQ9Y294 204 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 MTF2Q9Y483 593 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 TRAV20A0A0B4J274 112 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SERPINB7O75635 380 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 FTH1P02794 183 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 TLX1P31314 330 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 RGS19P49795 217 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ZNF81P51508 661 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 WNT3AP56704 352 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 SLC25A52Q3SY17 297 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 PSRC1Q6PGN9 363 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 MON1AQ86VX9 555 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 HAVCR1Q96D42 359 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 ASB2Q96Q27 587 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 DPCDQ9BVM2 203 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 NMUR2Q9GZQ4 415 aa10.93□□□□□ -0.66
SMARCE1-202ENST00000348513 IMP3Q9NV31 184 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms