RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ANXA5P08758 320 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 MYCLP1P12525 358 aaPredicted RBP10.74□□□□□ -0.69
ECM1-201ENST00000346569 TSPAN8P19075 237 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 ACADLP28330 430 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 PREPP48147 710 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 CCR3P51677 355 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 CCR5P51681 352 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 RPA4Q13156 261 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 C18orf21Q32NC0 220 aaPredicted RBP10.74□□□□□ -0.69
ECM1-201ENST00000346569 SH2D4BQ5SQS7 431 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 FRA10AC1Q70Z53 315 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 MTDHQ86UE4 582 aaKnown RBP10.74□□□□□ -0.69
ECM1-201ENST00000346569 LRRTM4Q86VH4 590 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 TRAPPC5Q8IUR0 188 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 KIRREL3Q8IZU9 778 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 SIX5Q8N196 739 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 OXR1Q8N573 874 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 FBXO15Q8NCQ5 510 aaPredicted RBP10.74□□□□□ -0.69
ECM1-201ENST00000346569 HM13Q8TCT9 377 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 MCOLN3Q8TDD5 553 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 TRPC4APQ8TEL6 797 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 UBTD2Q8WUN7 234 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 SKA1Q96BD8 255 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 FAR2Q96K12 515 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 LRRC37BQ96QE4 947 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 TMEM79Q9BSE2 394 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 TRIM54Q9BYV2 358 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 CD244Q9BZW8 370 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 WWP1Q9H0M0 922 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 OR52A5Q9H2C5 316 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 DPEP2Q9H4A9 486 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 FZD3Q9NPG1 666 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 SLC17A4Q9Y2C5 497 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 ST14Q9Y5Y6 855 aa10.74□□□□□ -0.69
ECM1-201ENST00000346569 A0A1B0GTL3 188 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 KLHL33A6NCF5 533 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 PRR19A6NJB7 356 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 TMEM233B4DJY2 109 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 H3BM21 787 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 KMOO15229 486 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 SEMA4FO95754 770 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 MLYCDO95822 493 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 CYP2A7P20853 494 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 SERPINB3P29508 390 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 PRDX3P30048 256 aaKnown RBP10.73□□□□□ -0.69
ECM1-201ENST00000346569 OXTRP30559 389 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 MAPK9P45984 424 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 AP1S2P56377 157 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 PFN3P60673 137 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 LCP2Q13094 533 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 NFE2L1Q14494 772 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 SLC9B1Q4ZJI4 515 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 SPDYAQ5MJ70 313 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 VWA5B1Q5TIE3 1220 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 METRNLQ641Q3 311 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 FAM91A1Q658Y4 838 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 FAM83HQ6ZRV2 1179 aaPredicted RBP10.73□□□□□ -0.69
ECM1-201ENST00000346569 AMZ2Q86W34 360 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 PGBD3Q8N328 593 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 OR56A4Q8NGH8 313 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 AGAP11Q8TF27 550 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 MAELQ96JY0 434 aaKnown RBP10.73□□□□□ -0.69
ECM1-201ENST00000346569 HGH1Q9BTY7 390 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 C6orf106Q9H6K1 298 aaPredicted RBP10.73□□□□□ -0.69
ECM1-201ENST00000346569 RMI1Q9H9A7 625 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 KLC4Q9NSK0 619 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 APOBEC2Q9Y235 224 aaKnown RBP10.73□□□□□ -0.69
ECM1-201ENST00000346569 PRKAB1Q9Y478 270 aa10.73□□□□□ -0.69
ECM1-201ENST00000346569 ATXN2Q99700 1313 aaKnown RBP10.73□□□□□ -0.69
ECM1-201ENST00000346569 ANKRD12Q6UB98 2062 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 ARHGEF33A8MVX0 844 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 K7EPI3 171 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 KCNJ13O60928 360 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 STK16O75716 305 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 UBOX5O94941 541 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 C1orf105O95561 183 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 APBB3O95704 486 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 ESRRBO95718 433 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 S100BP04271 92 aaPredicted RBP10.72□□□□□ -0.69
ECM1-201ENST00000346569 JUNP05412 331 aaKnown RBP10.72□□□□□ -0.69
ECM1-201ENST00000346569 IGHV4-34P06331 123 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 HIST1H2AGP0C0S8 130 aaPredicted RBP10.72□□□□□ -0.69
ECM1-201ENST00000346569 HIST1H2ADP20671 130 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 HNRNPA2B1P22626 353 aaKnown RBP10.72□□□□□ -0.69
ECM1-201ENST00000346569 PBLDP30039 288 aaPredicted RBP10.72□□□□□ -0.69
ECM1-201ENST00000346569 GDF5P43026 501 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 RPS9P46781 194 aaKnown RBP10.72□□□□□ -0.69
ECM1-201ENST00000346569 SLC6A12P48065 614 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 HSPA7P48741 367 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 HNMTP50135 292 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 INHBCP55103 352 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 CLDN2P57739 230 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 KIAA1024LP59773 190 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 YPEL5P62699 121 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 DMPKQ09013 629 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 BNIP1Q12981 228 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 SYTL3Q4VX76 610 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 PYCR3Q53H96 274 aa10.72□□□□□ -0.69
ECM1-201ENST00000346569 METTL21CQ5VZV1 264 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms