RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 APOBEC3GQ9HC16 384 aaKnown RBP11.92□□□□□ -0.5
COL12A1-202ENST00000345356 DTLQ9NZJ0 730 aa11.92□□□□□ -0.5
COL12A1-202ENST00000345356 DISP2A7MBM2 1401 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 NME6O75414 186 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CKMP06732 381 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ITPKAP23677 461 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CCR4P51679 360 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MANFP55145 182 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PCDH1Q08174 1060 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ATP6AP1Q15904 470 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 GRIK4Q16099 956 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 NIPA2Q8N8Q9 360 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 TMEM209Q96SK2 561 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 TLE6Q9H808 572 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MEGF6O75095 1541 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 B4GALT5O43286 388 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CLDN9O95484 217 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MT-CYBP00156 380 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PRKCHP24723 683 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ALDH7A1P49419 539 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 BMXP51813 675 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RAB2AP61019 212 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 HSDL1Q3SXM5 330 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RPTNQ6XPR3 784 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 KBTBD6Q86V97 674 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 KIF18BQ86Y91 864 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CDK5RAP1Q96SZ6 601 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CD93Q9NPY3 652 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CCM2LQ9NUG4 571 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MARCH2Q9P0N8 246 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ERVK-18Q9QC07 812 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PCDHB5Q9Y5E4 795 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 SMIM30A4D0T7 59 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 GPR182O15218 404 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CDC40O60508 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RFPL1O75677 317 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PLATP00750 562 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 GM2AP17900 193 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ERP29P30040 261 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MAGEA12P43365 314 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 HUNKP57058 714 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 KCNAB2Q13303 367 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RFTN1Q14699 578 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 SH3PXD2AQ5TCZ1 1133 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 EEF1DP3Q658K8 133 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MARCH9Q86YJ5 346 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 OR4K2Q8NGD2 314 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 BSNDQ8WZ55 320 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 C18orf25Q96B23 403 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 FAM163AQ96GL9 167 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 SLC45A3Q96JT2 553 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ALG5Q9Y673 324 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 LYPLA2O95372 231 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PTTG1O95997 202 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 IFNGP01579 166 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 EFNA1P20827 205 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RBBP4Q09028 425 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 DSC3Q14574 896 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 OCLNQ16625 522 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ZNF697Q5TEC3 545 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 FAM151BQ6UXP7 276 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 OAFQ86UD1 273 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CFAP206Q8IYR0 622 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RBFAQ8N0V3 343 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 SLA2Q9H6Q3 261 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 UPB1Q9UBR1 384 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 HCN2Q9UL51 889 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PCDHGB3Q9Y5G1 929 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 NFASCO94856 1347 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 TRAV6A0A075B6T7 132 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 METTL21EPA6NDL7 271 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 BTBD19C9JJ37 291 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 STK16O75716 305 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 C7P10643 843 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 RPL35P42766 123 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 GRIK5Q16478 980 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CDHR3Q6ZTQ4 885 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 KIAA0319LQ8IZA0 1049 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 LGI4Q8N135 537 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 TMEM86AQ8N2M4 240 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ZNF366Q8N895 744 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 CSGALNACT1Q8TDX6 532 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 TRIM43Q96BQ3 446 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 FCRL2Q96LA5 508 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 FAIM2Q9BWQ8 316 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 IDI2Q9BXS1 227 aa11.91□□□□□ -0.5
COL12A1-202ENST00000345356 ZCCHC2Q9C0B9 1178 aaKnown RBP11.91□□□□□ -0.5
COL12A1-202ENST00000345356 FAM83DQ9H4H8 585 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms