RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 DPYSL5Q9BPU6 564 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 HEMGNQ9BXL5 484 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 EPB41L1Q9H4G0 881 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 C6orf106Q9H6K1 298 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ZDHHC6Q9H6R6 413 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ARFGAP3Q9NP61 516 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 H2AFY2Q9P0M6 372 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 KLHL8Q9P2G9 620 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 PDP2Q9P2J9 529 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 SAE1Q9UBE0 346 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 LRCH1Q9Y2L9 728 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 EMC9Q9Y3B6 208 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 HEY1Q9Y5J3 304 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 U3KQA8 63 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 H3BMM5 538 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 K7ENP7 123 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 KCNK1O00180 336 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 RAD51CO43502 376 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 UGT2B4P06133 528 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CBSLP0DN79 551 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ACADMP11310 421 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 KELP23276 732 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ELAVL4P26378 380 aaKnown RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ACRV1P26436 265 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ACSL1P33121 698 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CBSP35520 551 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 RPL21P46778 160 aaKnown RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 PRIM2P49643 509 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CDR1P51861 262 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 GUCY1A3Q02108 690 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 TLE3Q04726 772 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 BTKQ06187 659 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 EIF2B5Q13144 721 aaKnown RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 PRSS53Q2L4Q9 553 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CCDC38Q502W7 563 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 AARS2Q5JTZ9 985 aaKnown RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 TTC23LQ6PF05 361 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 INO80CQ6PI98 192 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 TIFABQ6ZNK6 161 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 C20orf204Q6ZNR8 217 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
CCDC66-202ENST00000341455 PHACTR4Q8IZ21 702 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CCDC33Q8N5R6 958 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 OR6C4Q8NGE1 309 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CCDC110Q8TBZ0 833 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 CXorf40AQ8TE69 158 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 SAP25Q8TEE9 199 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 C1orf54Q8WWF1 131 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 C1orf159Q96HA4 380 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 TTC25Q96NG3 672 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 FAM167BQ9BTA0 163 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 VPS11Q9H270 941 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 IL26Q9NPH9 171 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 NLGN3Q9NZ94 848 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 GPRC5BQ9NZH0 403 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 COQ6Q9Y2Z9 468 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 ZNF451Q9Y4E5 1061 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 PCDHB1Q9Y5F3 818 aa3.44□□□□□ -1.86
CCDC66-202ENST00000341455 XIRP2A4UGR9 3374 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 FAM208BQ5VWN6 2430 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 PRAMEF27A3QJZ7 478 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 SDR42E2A6NKP2 422 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 FADS2P1A8MWK0 482 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 RAD51BO15315 384 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 NUAK1O60285 661 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 PPM1BO75688 479 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 CEACAM5P06731 702 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 NUDT17P0C025 328 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 CD72P21854 359 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ITGA3P26006 1051 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 EPHA8P29322 1005 aaPredicted RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 GPR3P46089 330 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 DUSP3P51452 185 aaPredicted RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 CSE1LP55060 971 aaKnown RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 PCBP4P57723 403 aaKnown RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 UBE2IP63279 158 aaKnown RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 CDK3Q00526 305 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 CDKL1Q00532 357 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 B4GALNT1Q00973 533 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 OCRLQ01968 901 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 MAP4K2Q12851 820 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 DNAJC3Q13217 504 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 NFATC2Q13469 925 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ZKSCAN8Q15776 578 aaPredicted RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 CCDC6Q16204 474 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ODF2Q5BJF6 829 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ANKRD22Q5VYY1 191 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 KAZNQ674X7 775 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 SLC6A19Q695T7 634 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ABRAXAS1Q6UWZ7 409 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 RNF165Q6ZSG1 346 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 TRMT10CQ7L0Y3 403 aaKnown RBP3.43□□□□□ -1.86
CCDC66-202ENST00000341455 PID1Q7Z2X4 250 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ADGRG6Q86SQ4 1221 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 NRROSQ86YC3 692 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 GPR26Q8NDV2 337 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 ADCY4Q8NFM4 1077 aa3.43□□□□□ -1.86
CCDC66-202ENST00000341455 SPATA22Q8NHS9 363 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms