RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 PHF19Q5T6S3 580 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 AGAP9Q5VTM2 703 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ARMC3Q5W041 872 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 TMEM26Q6ZUK4 368 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ZNF438Q7Z4V0 828 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 LRRC6Q86X45 466 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 C17orf82Q86X59 251 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CNTN4Q8IWV2 1026 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ZBTB2Q8N680 514 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 TFGQ92734 400 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 OLFM1Q99784 485 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 SCNM1Q9BWG6 230 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 SLC40A1Q9NP59 571 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 RRAGDQ9NQL2 400 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CDYLQ9Y232 598 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 COL27A1Q8IZC6 1860 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 OR5K4A6NMS3 321 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 F8W8V4 182 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
TUBD1-202ENST00000340993 STX2P32856 288 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 FASLGP48023 281 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 CLCN7P51798 805 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 GFERP55789 205 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 VSNL1P62760 191 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 BMPR2Q13873 1038 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
TUBD1-202ENST00000340993 SLMAPQ14BN4 828 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 HECTD2Q5U5R9 776 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 OR4E2Q8NGC2 313 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 ASZ1Q8WWH4 475 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 CDKL2Q92772 493 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 SEMA6CQ9H3T2 930 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 ABCF3Q9NUQ8 709 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 POT1Q9NUX5 634 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 TRMT6Q9UJA5 497 aaKnown RBP12.88□□□□□ -0.35
TUBD1-202ENST00000340993 SLC39A10Q9ULF5 831 aa12.88□□□□□ -0.35
TUBD1-202ENST00000340993 MTO1Q9Y2Z2 717 aaKnown RBP12.88□□□□□ -0.35
TUBD1-202ENST00000340993 IGHV1OR21-1A0A087WYE8 117 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 FAM95CA0A1B0GW59 222 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 PMS2P1A4D2B8 440 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 H3BMM5 538 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 KCNJ13O60928 360 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 VPS26AO75436 327 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 UBXN7O94888 489 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 MT-CO3P00414 261 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 XRCC1P18887 633 aaPredicted RBP12.87□□□□□ -0.35
TUBD1-202ENST00000340993 TIAL1Q01085 375 aaKnown RBP eCLIP12.87□□□□□ -0.35
TUBD1-202ENST00000340993 TARDBPQ13148 414 aaKnown RBP eCLIP12.87□□□□□ -0.35
TUBD1-202ENST00000340993 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 CCSMST1Q4G0I0 132 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
TUBD1-202ENST00000340993 IRGCQ6NXR0 463 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 FAM92BQ6ZTR7 304 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 PIWIL4Q7Z3Z4 852 aaKnown RBP12.87□□□□□ -0.35
TUBD1-202ENST00000340993 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
TUBD1-202ENST00000340993 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 CD200R1Q8TD46 325 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 UBXN4Q92575 508 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 TGM7Q96PF1 710 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 WASH6PQ9NQA3 447 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 LATS2Q9NRM7 1088 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 LAMA5O15230 3695 aa12.87□□□□□ -0.35
TUBD1-202ENST00000340993 OR6C74A6NCV1 312 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 FAM159BA6NKW6 160 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 D6RAR5 112 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 POC1B-GALNT4F8VUJ3 575 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 CSO75390 466 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 GPC4O75487 556 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PROS1P07225 676 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 GP1BAP07359 652 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 HGFP14210 728 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 CD1CP29017 333 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 CFHR1Q03591 330 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 TSTA3Q13630 321 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 FBXO38Q6PIJ6 1188 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PAQR3Q6TCH7 311 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 RBM44Q6ZP01 1051 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 KIAA0408Q6ZU52 694 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 SLC22A15Q8IZD6 547 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 OR6C4Q8NGE1 309 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 ADAMTS14Q8WXS8 1223 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 SLC24A2Q9UI40 661 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PCDHGA1Q9Y5H4 931 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PHGDHO43175 533 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 DUX1O43812 170 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 SYF2O95926 243 aaKnown RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 POLR2CP19387 275 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-202ENST00000340993 ACADLP28330 430 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 PHBP35232 272 aa12.86□□□□□ -0.35
TUBD1-202ENST00000340993 SEPHS1P49903 392 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms