RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SLC9A5Q14940 896 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SAMD14Q8IZD0 417 aaPredicted RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 FNTBP49356 437 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 FAM98AQ8NCA5 519 aaKnown RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 TSSK3Q96PN8 268 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 KCNH6Q9H252 994 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 ZMIZ2Q8NF64 920 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 HNRNPLLQ8WVV9 542 aaKnown RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 SMPDL3BQ92485 455 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SEC16BQ96JE7 1060 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 C5orf34Q96MH7 638 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SIKE1Q9BRV8 207 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 MCIDASD6RGH6 385 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 CBSLP0DN79 551 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 CTHP32929 405 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 CBSP35520 551 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 RXRGP48443 463 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 BTN3A2P78410 334 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SLBPQ14493 270 aaKnown RBP eCLIP12.59□□□□□ -0.39
LIN54-201ENST00000340417 SLC9A4Q6AI14 798 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 AP3M1Q9Y2T2 418 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 HNMTP50135 292 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 LIMK2P53671 638 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 MRPS22P82650 360 aaKnown RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 JPH3Q8WXH2 748 aaPredicted RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 NSMCE2Q96MF7 247 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 MYADMQ96S97 322 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SCHIP1Q9P0W5 487 aaPredicted RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 PCDH10Q9P2E7 1040 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 CCL26Q9Y258 94 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 PTPN5P54829 565 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 HEPACAMQ14CZ8 416 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 KCTD19Q17RG1 926 aaPredicted RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 LRRC57Q8N9N7 239 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 CLHC1Q8NHS4 586 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 DDX1Q92499 740 aaKnown RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 SLC25A23Q9BV35 468 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ADI1Q9BV57 179 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 TRIM39Q9HCM9 518 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 AP3D1O14617 1153 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ABLIM3O94929 683 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 STATHP02808 62 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 C1orf53Q5VUE5 145 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 GAREM2Q75VX8 874 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ATG16L2Q8NAA4 619 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 AGAP2Q99490 1192 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 PREBQ9HCU5 417 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 C15orf38-AP3S2A0A0A6YYH1 394 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 DCLK1O15075 740 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 B4GALT2O60909 372 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 HOXC13P31276 330 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 CLDN2P57739 230 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 SRP54P61011 504 aaKnown RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 TRAF2Q12933 501 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 SPDYCQ5MJ68 293 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 MPP7Q5T2T1 576 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 TRPM8Q7Z2W7 1104 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ARPINQ7Z6K5 226 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 NXPE1Q8N323 547 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 METTL27Q8N6F8 245 aaPredicted RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 ITCHQ96J02 903 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 TRMOQ9BU70 441 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 MCCC2Q9HCC0 563 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 IFT80Q9P2H3 777 aaPredicted RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 WASH3PC4AMC7 463 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 RFXANKO14593 260 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ERI3O43414 337 aaKnown RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 PLGP00747 810 aaPredicted RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 ZNF24P17028 368 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ME2P23368 584 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ITGB7P26010 798 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 HYAL1Q12794 435 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 TOR1AIP1Q5JTV8 583 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 KHDRBS2Q5VWX1 349 aaKnown RBP12.58□□□□□ -0.4
LIN54-201ENST00000340417 C10orf107Q8IVU9 208 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 KCT2Q8NC54 265 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ART5Q96L15 291 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 CYTH4Q9UIA0 394 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 MKL2Q9ULH7 1088 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 KCTD3Q9Y597 815 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 A0A1B0GTW7 788 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 SERPINB7O75635 380 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ZNF23P17027 643 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 HYAL2Q12891 473 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 SGCBQ16585 318 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 C1orf220Q5T0J3 134 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 DCBLD1Q8N8Z6 715 aa12.58□□□□□ -0.4
LIN54-201ENST00000340417 ZNF75CPQ92670 426 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms