RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PCDHB3Q9Y5E6 796 aa12.99□□□□□ -0.33
NUDCD3-201ENST00000338427 MROH6A6NGR9 719 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 MIF4GDA9UHW6 222 aaKnown RBP12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 CFAP99D6REC4 459 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 H7C0S8 307 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 HCRTR1O43613 425 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 SCRG1O75711 98 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 ZBTB11O95625 1053 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 IFNB1P01574 187 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 PDGFAP04085 211 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 CTSBP07858 339 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 LMAN1P49257 510 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 CSRP3P50461 194 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 MC1RQ01726 317 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 CACNG1Q06432 222 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 ABRQ12979 859 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 CHAF1BQ13112 559 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 PLEKHS1Q5SXH7 462 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 LDB1Q86U70 411 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 TRIM73Q86UV7 250 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 FAM20CQ8IXL6 584 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 ACVR1CQ8NER5 493 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 OR5AR1Q8NGP9 310 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 OR1L3Q8NH93 324 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 TFGQ92734 400 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 MR1Q95460 341 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 HGH1Q9BTY7 390 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 EPN3Q9H201 632 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 CHST8Q9H2A9 424 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 ACTL8Q9H568 366 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 SOHLH2Q9NX45 425 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 FEZ2Q9UHY8 353 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 FARSAQ9Y285 508 aaKnown RBP12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 TP53TG5Q9Y2B4 290 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 MYO18BQ8IUG5 2567 aa12.98□□□□□ -0.33
NUDCD3-201ENST00000338427 PIKFYVEQ9Y2I7 2098 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 BHMG1C9JSJ3 638 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 PSMD3O43242 534 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 LIASO43766 372 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 PSMA3P25788 255 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 MSNP26038 577 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 NDUFS1P28331 727 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 FOXN2P32314 431 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 TUBB4BP68371 445 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 TUBB2AQ13885 445 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 BOP1Q14137 746 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 SEMA3AQ14563 771 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 KMT5CQ86Y97 462 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 SLC13A5Q86YT5 568 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 TMEM126BQ8IUX1 230 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 TMEM151BQ8IW70 566 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 DNAAF3Q8N9W5 541 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 OR13J1Q8NGT2 312 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 HEXDCQ8WVB3 486 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 TRAPPC9Q96Q05 1148 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 ALS2CR12Q96Q35 445 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 CD180Q99467 661 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 TUBB2BQ9BVA1 445 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 FAM60AQ9NP50 221 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 SPHK1Q9NYA1 384 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 CIDEBQ9UHD4 219 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 POMT2Q9UKY4 750 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF148Q9UQR1 794 aa12.97□□□□□ -0.33
NUDCD3-201ENST00000338427 MED13Q9UHV7 2174 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 SPTA1P02549 2419 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 IQCF5A8MTL0 148 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TMEM150CB9EJG8 249 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 IFRD1O00458 451 aaPredicted RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 GOT2P00505 430 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 ACADLP28330 430 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 PTPN4P29074 926 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 RPL22P35268 128 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 PRKAA1Q13131 559 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 IL10RAQ13651 578 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 LAMB3Q13751 1172 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 SIX1Q15475 284 aaPredicted RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 ZIC1Q15915 447 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 CRTC2Q53ET0 693 aaPredicted RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF789Q5FWF6 425 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TMTC4Q5T4D3 741 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TSTD2Q5T7W7 516 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 CPZQ66K79 652 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 UNC5AQ6ZN44 842 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 ZNF534Q76KX8 674 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 AMIGO1Q86WK6 493 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 SPNS2Q8IVW8 549 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 C2orf73Q8N5S3 287 aaPredicted RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 ELMO1Q92556 727 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 FCRL4Q96PJ5 515 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 SPRTNQ9H040 489 aaPredicted RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 TFB2MQ9H5Q4 396 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 RAB6BQ9NRW1 208 aa12.96□□□□□ -0.33
NUDCD3-201ENST00000338427 C1GALT1Q9NS00 363 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms