RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TAOK1Q7L7X3 1001 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CNPY4Q8N129 248 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 EFCAB3Q8N7B9 438 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 Q8N9G6 341 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 PHC3Q8NDX5 983 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CFAP61Q8NHU2 1237 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 WDR48Q8TAF3 677 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 MAGEC3Q8TD91 643 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CCDC74AQ96AQ1 378 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 RMDN2Q96LZ7 410 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 TRIT1Q9H3H1 467 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 KCNK4Q9NYG8 393 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 POLG2Q9UHN1 485 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC39A10Q9ULF5 831 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CDYLQ9Y232 598 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 ASF1AQ9Y294 204 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 MTO1Q9Y2Z2 717 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CFAP20Q9Y6A4 193 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 U3KQA8 63 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 EXOC1LA0A1B0GW35 172 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 GIPC1O14908 333 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 ERLIN1O75477 346 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 KRT38O76015 456 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 MPC1LP0DKB6 136 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 FDXRP22570 491 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 LIMK2P53671 638 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 TAS2R39P59534 338 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 NAA30Q147X3 362 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 KLHL35Q6PF15 583 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 PAQR3Q6TCH7 311 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 XKR5Q6UX68 686 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 UNC5DQ6UXZ4 953 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 ZNF438Q7Z4V0 828 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 SLCO6A1Q86UG4 719 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 VRK3Q8IV63 474 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 TBC1D21Q8IYX1 336 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 NKAPQ8N5F7 415 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 OR10G6Q8NH81 332 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 CD200R1Q8TD46 325 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 AENQ8WTP8 325 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC44A1Q8WWI5 657 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 CAVIN3Q969G5 261 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 AHCYL2Q96HN2 611 aaKnown RBP11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 GPR22Q99680 433 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 CCDC3Q9BQI4 270 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 MCMBPQ9BTE3 642 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 EPB41L1Q9H4G0 881 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 POPDC3Q9HBV1 291 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 MED16Q9Y2X0 877 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 PIEZO1Q92508 2521 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 VPS13AQ96RL7 3174 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 MYLKQ15746 1914 aa11.62□□□□□ -0.55
SPTLC1-202ENST00000337841 ZNF106Q9H2Y7 1883 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 B4GAT1O43505 415 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 ZBTB14O43829 449 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 OPA1O60313 960 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 FAM155BO75949 473 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 KRT37O76014 449 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 ITGA2BP08514 1039 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 STMN1P16949 149 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 AMD1P17707 334 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 CNTFP26441 200 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 CRABP2P29373 138 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 CCNFP41002 786 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 EPHA4P54764 986 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 OR1D5P58170 312 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 CCL7P80098 99 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 GPLD1P80108 840 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 TIAL1Q01085 375 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 GBX1Q14549 363 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 NR1D2Q14995 579 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 EFTUD2Q15029 972 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 CLPPQ16740 277 aaPredicted RBP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 PPM1JQ5JR12 505 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 PERM1Q5SV97 790 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 UBAP2Q5T6F2 1119 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 CPNE9Q8IYJ1 553 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 MYO1HQ8N1T3 1032 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 ACVR1CQ8NER5 493 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 EEF1AKMT1Q8WVE0 214 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 PAFAH2Q99487 392 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC30A3Q99726 388 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 OLFM1Q99784 485 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 LRRN3Q9H3W5 708 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 KIR3DX1Q9H7L2 352 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 PPCSQ9HAB8 311 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 FETUBQ9UGM5 382 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC24A2Q9UI40 661 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 ZNF180Q9UJW8 692 aa11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 TDRKHQ9Y2W6 561 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 TDRD6O60522 2096 aaKnown RBP11.61□□□□□ -0.55
SPTLC1-202ENST00000337841 TMEM131Q92545 1883 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 LILRA5A6NI73 299 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 MATN4O95460 622 aa11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 CATP04040 527 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 RPLP0P05388 317 aaKnown RBP11.6□□□□□ -0.55
SPTLC1-202ENST00000337841 MAP4P27816 1152 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms