RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 OGFRL1Q5TC84 451 aaPredicted RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 ENPP6Q6UWR7 440 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 SIX5Q8N196 739 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 PSMA8Q8TAA3 256 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 SGCDQ92629 289 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 TMEM159Q96B96 161 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 TRMOQ9BU70 441 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 NDEL1Q9GZM8 345 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 LRTM1Q9HBL6 345 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 FAM32AQ9Y421 112 aaKnown RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 TESMINQ9Y4I5 508 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 PCDHGA4Q9Y5G9 962 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 COL11A1P12107 1806 aaPredicted RBP8.09□□□□□ -1.11
HPS4-201ENST00000336873 TANC1Q9C0D5 1861 aa8.09□□□□□ -1.11
HPS4-201ENST00000336873 A0A1B0GVM2 712 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 CYP7B1O75881 506 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 DLGAP3O95886 979 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 OTCP00480 354 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 EPORP19235 508 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 OR1E2P47887 323 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 PREPP48147 710 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 TMED10P49755 219 aaKnown RBP8.09□□□□□ -1.12
HPS4-201ENST00000336873 YBEYP58557 167 aaPredicted RBP8.09□□□□□ -1.12
HPS4-201ENST00000336873 TRIM60Q495X7 471 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 CLEC14AQ86T13 490 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 ELMOD1Q8N336 334 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 CNIH3Q8TBE1 160 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 OSCP1Q8WVF1 389 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 HTRA1Q92743 480 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 KLK6Q92876 244 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 WBP2Q969T9 261 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 FUBP1Q96AE4 644 aaKnown RBP8.09□□□□□ -1.12
HPS4-201ENST00000336873 SLC47A1Q96FL8 570 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 CAPNS2Q96L46 248 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 HOPXQ9BPY8 73 aaPredicted RBP8.09□□□□□ -1.12
HPS4-201ENST00000336873 KLHL25Q9H0H3 589 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 MARCH7Q9H992 704 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 POLE4Q9NR33 117 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 IFT80Q9P2H3 777 aaPredicted RBP8.09□□□□□ -1.12
HPS4-201ENST00000336873 VPS9D1Q9Y2B5 631 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 ST14Q9Y5Y6 855 aa8.09□□□□□ -1.12
HPS4-201ENST00000336873 SZT2Q5T011 3432 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 C16orf96A6NNT2 1141 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 H7C4K7 107 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 GSTM1P09488 218 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 UROSP10746 265 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ALOX15P16050 662 aaPredicted RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 DGKAP23743 735 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SERPINA4P29622 427 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 CHI3L1P36222 383 aaPredicted RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 ATP6V1E1P36543 226 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TNK2Q07912 1038 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SEMA3BQ13214 749 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 CHIT1Q13231 466 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 PDE12Q6L8Q7 609 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 KDELC1Q6UW63 502 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SUSD1Q6UWL2 747 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TMPRSS11BQ86T26 416 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ADAMTSL2Q86TH1 951 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 RTN4RL1Q86UN2 441 aaPredicted RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 FRS2Q8WU20 508 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 RORBQ92753 470 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TSGA13Q96PP4 275 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 RPF2Q9H7B2 306 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 DDX28Q9NUL7 540 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 TMEM39AQ9NV64 488 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SELENONQ9NZV5 590 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 UTS2RQ9UKP6 389 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 PADI4Q9UM07 663 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 H0Y858 1186 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 H3BN98 237 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 BOLA2-SMG1P6H3BVE0 249 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 MITFO75030 526 aaPredicted RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 MSH3P20585 1137 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ATP6V0D1P61421 351 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ANKDD1AQ495B1 522 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ADGRF1Q5T601 910 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 FAM171BQ6P995 826 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.08□□□□□ -1.124e-8■□□□□ 10.8
HPS4-201ENST00000336873 CYS1Q717R9 158 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 PIWIL3Q7Z3Z3 882 aaKnown RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 GOLGA7Q7Z5G4 137 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SMYD1Q8NB12 490 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ARRDC2Q8TBH0 407 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 MCOLN3Q8TDD5 553 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SLC22A17Q8WUG5 538 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SLC13A3Q8WWT9 602 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 GPR78Q96P69 363 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TUBB1Q9H4B7 451 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TREX1Q9NSU2 369 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 PDP1Q9P0J1 537 aaPredicted RBP8.08□□□□□ -1.12
HPS4-201ENST00000336873 RHCGQ9UBD6 479 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 TRPC4Q9UBN4 977 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 VPS51Q9UID3 782 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 RIMS3Q9UJD0 308 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 SCML2Q9UQR0 700 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 A0A1W2PP18 115 aa8.08□□□□□ -1.12
HPS4-201ENST00000336873 ELOVL7A1L3X0 281 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms