RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CERS6Q6ZMG9 384 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 KBTBD6Q86V97 674 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 MMAAQ8IVH4 418 aaKnown RBP12.33□□□□□ -0.43
LIMK1-201ENST00000336180 FRS2Q8WU20 508 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 MED8Q96G25 268 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 DCUN1D1Q96GG9 259 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 P2RY13Q9BPV8 354 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 ZDHHC3Q9NYG2 299 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 SLC22A14Q9Y267 594 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.43
LIMK1-201ENST00000336180 MMP20O60882 483 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 UROSP10746 265 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 HOXB8P17481 243 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-201ENST00000336180 VCLP18206 1134 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 ATP6V1B2P21281 511 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 BDKRB1P46663 353 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 MTPNP58546 118 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 C6orf10Q5SRN2 563 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 SLC30A9Q6PML9 568 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 ANKRD46Q86W74 232 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 FGF13Q92913 245 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.44
LIMK1-201ENST00000336180 ECHDC3Q96DC8 303 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 RPP25Q9BUL9 199 aaKnown RBP12.33□□□□□ -0.44
LIMK1-201ENST00000336180 PBX4Q9BYU1 374 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 ACTR8Q9H981 624 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 NDUFAF1Q9Y375 327 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 N6AMT1Q9Y5N5 214 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 WDR47O94967 919 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 NSG1P42857 185 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 TRAF3Q13114 568 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 SELPLGQ14242 412 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 ATP6AP1LQ52LC2 224 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 LRRC23Q53EV4 343 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-201ENST00000336180 OR10Q1Q8NGQ4 319 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 RHBDF1Q96CC6 855 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 MYOCQ99972 504 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 KXD1Q9BQD3 176 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 SLC25A23Q9BV35 468 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 IL36AQ9UHA7 158 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 ZNF490Q9ULM2 529 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-201ENST00000336180 GPR45Q9Y5Y3 372 aa12.33□□□□□ -0.44
LIMK1-201ENST00000336180 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 GSNP06396 782 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 FGF4P08620 206 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 ELFN1P0C7U0 828 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 TANGO2Q6ICL3 276 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 EBPLQ9BY08 206 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 RETREG1Q9H6L5 497 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 CAAP1Q9H8G2 361 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 CMTM6Q9NX76 183 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 NUDT4Q9NZJ9 180 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 RPL26L1Q9UNX3 145 aaKnown RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 DYTNA2CJ06 578 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 TRIM38O00635 465 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 ACOT8O14734 319 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 RNASEH1O60930 286 aaKnown RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 FKBP6O75344 327 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 MYCLP1P12525 358 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 PTCHD3Q3KNS1 767 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 GTDC1Q4AE62 458 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 MTX3Q5HYI7 312 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 CAPRIN2Q6IMN6 1127 aaKnown RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 LRGUKQ96M69 825 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 HTATIP2Q9BUP3 242 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 MCOLN1Q9GZU1 580 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 SPAG4Q9NPE6 437 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 IRAK3Q9Y616 596 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 CFAP20Q9Y6A4 193 aaKnown RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 HEPACAM2A8MVW5 462 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 STX16O14662 325 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 SEC22BO75396 215 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 MLYCDO95822 493 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 ATP1B2P14415 290 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 CKMT2P17540 419 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 MSH3P20585 1137 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 SEC13P55735 322 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 KCNK10P57789 538 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 IMPG1Q17R60 797 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 NPAS3Q8IXF0 933 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 PQLC1Q8N2U9 271 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 AP2M1Q96CW1 435 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 AURKBQ96GD4 344 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 TSSK3Q96PN8 268 aa12.32□□□□□ -0.44
LIMK1-201ENST00000336180 PCYT1BQ9Y5K3 369 aaPredicted RBP12.32□□□□□ -0.44
LIMK1-201ENST00000336180 DENND4CQ5VZ89 1909 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 TRBV5-4A0A0C4DH59 114 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 CCDC154A6NI56 674 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SAC3D1A6NKF1 404 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 FXYD1O00168 92 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 LATO43561 262 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 AKAP10O43572 662 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 PRAMEF4O60810 478 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 SLC22A3O75751 556 aa12.31□□□□□ -0.44
LIMK1-201ENST00000336180 MAPK8P45983 427 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms