RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RHOJQ9H4E5 214 aa11.62□□□□□ -0.55
HDAC6-201ENST00000334136 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 FAM170BA6NMN3 283 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 H3BMM5 538 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TAF4O00268 1085 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TRAFD1O14545 582 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TOR1BO14657 336 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 NPC1O15118 1278 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ECI2O75521 394 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 SRCP12931 536 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 SLC18A2Q05940 514 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ESRP1Q6NXG1 681 aaKnown RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 WBP2Q969T9 261 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 IL12RB2Q99665 862 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 HGH1Q9BTY7 390 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TEKT2Q9UIF3 430 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 WDR81Q562E7 1941 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 CDK14O94921 469 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 YAP1P46937 504 aaKnown RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 HK2P52789 917 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 LIMK2P53671 638 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 MPP1Q00013 466 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 HSPA14Q0VDF9 509 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 OLIG2Q13516 323 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 DGUOKQ16854 277 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 PAGE2BQ5JRK9 111 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TSTD2Q5T7W7 516 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ARMC6Q6NXE6 501 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ADCK2Q7Z695 626 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 FSTL5Q8N475 847 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 DRAXINQ8NBI3 349 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 NRG4Q8WWG1 115 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 LRIG1Q96JA1 1093 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 SMAD5Q99717 465 aaKnown RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 OSBPL6Q9BZF3 934 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 DPY30Q9C005 99 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 MTG2Q9H4K7 406 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ADAMTS6Q9UKP5 1117 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 CAB39Q9Y376 341 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 J3QRK9 145 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TRIM24O15164 1050 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 NADKO95544 446 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 CPSF4O95639 269 aaKnown RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 GSRP00390 522 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 GSNP06396 782 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 AOC1P19801 751 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ST13P50502 369 aaKnown RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 CCDC157Q569K6 752 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 SIRPB2Q5JXA9 342 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ARMC4Q5T2S8 1044 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 LYPLAL1Q5VWZ2 237 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 XKR5Q6UX68 686 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 VPS33AQ96AX1 596 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 FBXL8Q96CD0 374 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 ZNF641Q96N77 438 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-201ENST00000334136 PARVBQ9HBI1 364 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 KCTD5Q9NXV2 234 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 GPSM3Q9Y4H4 160 aa11.61□□□□□ -0.55
HDAC6-201ENST00000334136 TMEM247A6NEH6 219 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 FOXD2O60548 495 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 SOCS5O75159 536 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 SH3BGRLO75368 114 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 VNN2O95498 520 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 PRAMEF1O95521 474 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 ZNF234Q14588 700 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 TAF1AQ15573 450 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 TJAP1Q5JTD0 557 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 IL27RAQ6UWB1 636 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 DENND6AQ8IWF6 608 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 ARHGAP12Q8IWW6 846 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 RBFAQ8N0V3 343 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 CDYL2Q8N8U2 506 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 PRICKLE1Q96MT3 831 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 HBEGFQ99075 208 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 SPATA6Q9NWH7 488 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 EURLQ9NYK6 297 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 FKBPLQ9UIM3 349 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 ACTL7AQ9Y615 435 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 EPOPA6NHQ4 379 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 SMAD6O43541 496 aaKnown RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 CCNT2O60583 730 aaKnown RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 ADH1BP00325 375 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 EPOP01588 193 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 DBTP11182 482 aaKnown RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 HALP42357 657 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 CTSOP43234 321 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 CSTF3Q12996 717 aaKnown RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 ZNF805Q5CZA5 627 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 TTC23Q5W5X9 447 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 LYSMD3Q7Z3D4 306 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 SIX5Q8N196 739 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 HTRA1Q92743 480 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 MTERF3Q96E29 417 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 IMP4Q96G21 291 aaKnown RBP11.6□□□□□ -0.55
HDAC6-201ENST00000334136 COX4I2Q96KJ9 171 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 PPM1MQ96MI6 270 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 POLG2Q9UHN1 485 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 PSAT1Q9Y617 370 aa11.6□□□□□ -0.55
HDAC6-201ENST00000334136 TCRBV21S2A2A0A5A6 115 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms