RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 DGCR6Q14129 220 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 PAGE3Q5JUK9 113 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 KDM4DQ6B0I6 523 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 SWSAP1Q6NVH7 229 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 SPESP1Q6UW49 350 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 SNX20Q7Z614 316 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 AMIGO1Q86WK6 493 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 C1orf52Q8N6N3 182 aaKnown RBP8.25□□□□□ -1.09
SKA2-201ENST00000330137 FNDC5Q8NAU1 212 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 PPHLN1Q8NEY8 458 aaKnown RBP8.25□□□□□ -1.09
SKA2-201ENST00000330137 RNF139Q8WU17 664 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 DMRTB1Q96MA1 342 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 TMEM209Q96SK2 561 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 HTATIP2Q9BUP3 242 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 PPA2Q9H2U2 334 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 PLEKHA5Q9HAU0 1116 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 POPDC3Q9HBV1 291 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 ACSS2Q9NR19 701 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 GLS2Q9UI32 602 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 STUB1Q9UNE7 303 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 SBF1O95248 1867 aa8.25□□□□□ -1.09
SKA2-201ENST00000330137 FAM170BA6NMN3 283 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PLD2O14939 933 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PIP5K1BO14986 540 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 WDPCPO95876 746 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 BDNFP23560 247 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CYP2C18P33260 490 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 LIPAP38571 399 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 KCNC1P48547 511 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 NRIP1P48552 1158 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 ERVK-8P63133 956 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 KCNC3Q14003 757 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CSHL1Q14406 222 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 TIGD6Q17RP2 521 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CLEC6AQ6EIG7 209 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 METTL2BQ6P1Q9 378 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 DLEU7Q6UYE1 221 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 BNIPLQ7Z465 357 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 VSIG10LQ86VR7 867 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 MFSD6LQ8IWD5 586 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 GDPD1Q8N9F7 314 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CCNYQ8ND76 341 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 UBA3Q8TBC4 463 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 TUBGCP3Q96CW5 907 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 TOE1Q96GM8 510 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 RPRD1AQ96P16 312 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 TSGA13Q96PP4 275 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 MLPHQ9BV36 600 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 TMEM168Q9H0V1 697 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 RNF121Q9H920 327 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CDHR5Q9HBB8 845 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 JPH1Q9HDC5 661 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 PIH1D1Q9NWS0 290 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 TEKT2Q9UIF3 430 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 TMPRSS11EQ9UL52 423 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 SNX6Q9UNH7 406 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 MAPRE3Q9UPY8 281 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 GMPPBQ9Y5P6 360 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 M0R082 166 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 TFECO14948 347 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 NOBOXO60393 691 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CPNE3O75131 537 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 USP12O75317 370 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PAPSS2O95340 614 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 DBTP11182 482 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 CYP2A6P11509 494 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 PCSK2P16519 638 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 RPL17P18621 184 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 SAT1P21673 171 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 KCNA5P22460 613 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 MYL9P24844 172 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 CBX5P45973 191 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 ALDH9A1P49189 494 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 SH3BP2P78314 561 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 GRB7Q14451 532 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 GBX1Q14549 363 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 SUPT20HL1Q3ZLR7 823 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 XKR7Q5GH72 579 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 MPZL3Q6UWV2 235 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 GPR149Q86SP6 731 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 DPP9Q86TI2 863 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 ASB15Q8WXK1 588 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 RHBDF1Q96CC6 855 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PDXPQ96GD0 296 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PIWIL1Q96J94 861 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 C1QTNF3Q9BXJ4 246 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 ASB7Q9H672 318 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PAK6Q9NQU5 681 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 ENTPD7Q9NQZ7 604 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 DCAF13Q9NV06 445 aaKnown RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 SIX4Q9UIU6 781 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 ELF5Q9UKW6 265 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 PNMA8BQ9ULN7 279 aaPredicted RBP8.24□□□□□ -1.09
SKA2-201ENST00000330137 MFHAS1Q9Y4C4 1052 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 IPPQ9Y573 584 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 PCDHB5Q9Y5E4 795 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 ADAMTSL1Q8N6G6 1762 aa8.24□□□□□ -1.09
SKA2-201ENST00000330137 A0A1B0GVM2 712 aa8.23□□□□□ -1.09
SKA2-201ENST00000330137 OR6C70A6NIJ9 312 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms