RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 QRFPRQ96P65 431 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 FUZQ9BT04 418 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CCDC32Q9BV29 185 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 AGO4Q9HCK5 861 aaKnown RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 NUDT15Q9NV35 164 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TSPAN16Q9UKR8 245 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 RFXANKO14593 260 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 NPHS1O60500 1241 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TGM6O95932 706 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 ITGB1P05556 798 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 RHOAP61586 193 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CPTPQ5TA50 214 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CCBE1Q6UXH8 406 aaPredicted RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 C3orf67Q6ZVT6 689 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TFAP2DQ7Z6R9 452 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 THAP6Q8TBB0 222 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CGREF1Q99674 301 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 FDXACB1Q9BRP7 624 aaPredicted RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 POLE4Q9NR33 117 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 RBM22Q9NW64 420 aaKnown RBP eCLIP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 EBF1Q9UH73 591 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CMAHPQ9Y471 501 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TNFRSF10AO00220 468 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CCNDBP1O95273 360 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 SPARCP09486 303 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 MTAPQ13126 283 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CYP1B1Q16678 543 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 SETMARQ53H47 684 aaPredicted RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CXCL17Q6UXB2 119 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 PAMR1Q6UXH9 720 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CHCHD4Q8N4Q1 142 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 FAM156AQ8NDB6 213 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 ING5Q8WYH8 240 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CELF6Q96J87 481 aaKnown RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 KRBA1A5PL33 1030 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 FAM86C2PA6NEL3 165 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 RIIAD1A6NNX1 92 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TSTD3H0UI37 97 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 H0YGN5 161 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CALCAP01258 141 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 NCK1P16333 377 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 EPCAMP16422 314 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TAGLNQ01995 201 aaKnown RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 DET1Q7L5Y6 550 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 OR10T2Q8NGX3 314 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 OR8K3Q8NH51 312 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 CD99L2Q8TCZ2 262 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 RDH12Q96NR8 316 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 NUSAP1Q9BXS6 441 aaKnown RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 NFS1Q9Y697 457 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TTC34A8MYJ7 566 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 NOBOXO60393 691 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 PAPSS2O95340 614 aaPredicted RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 KIR3DL1P43629 444 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 ADAM8P78325 824 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 VGLL4Q14135 290 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TMEM44Q2T9K0 475 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 USP50Q70EL3 339 aaPredicted RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TRAPPC5Q8IUR0 188 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 MCEMP1Q8IX19 187 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 METTL25Q8N6Q8 603 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 COQ8AQ8NI60 647 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TWIST2Q8WVJ9 160 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 PPP1R16AQ96I34 528 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 ZNF558Q96NG5 402 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 BHLHE41Q9C0J9 482 aaPredicted RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 TBC1D17Q9HA65 648 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 SACM1LQ9NTJ5 587 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 ARMC1Q9NVT9 282 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 MED13LQ71F56 2210 aa5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 ZNFX1Q9P2E3 1918 aaKnown RBP5.3□□□□□ -1.56
SDR42E1-201ENST00000328945 H3BNH8 94 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 ATP6AP2O75787 350 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 INSRRP14616 1297 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 UBA1P22314 1058 aaKnown RBP5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 RYKP34925 604 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 TTPAP49638 278 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 AP2S1P53680 142 aaPredicted RBP5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 GCNT6Q5T4J0 391 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 FAM198BQ6UWH4 519 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 OAFQ86UD1 273 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 UBQLNLQ8IYU4 475 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 OR4A15Q8NGL6 344 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 USP7Q93009 1102 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 TMEM159Q96B96 161 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 FEM1CQ96JP0 617 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 FAM84AQ96KN4 292 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 BBS4Q96RK4 519 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 FBXO44Q9H4M3 255 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 SEMA3GQ9NS98 782 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 GULP1Q9UBP9 304 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 GPSM3Q9Y4H4 160 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 COL3A1P02461 1466 aaPredicted RBP5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 RFPL1O75677 317 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 USP17L7P0C7H9 530 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 THEGLP0DJG4 465 aa5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 CYP2A6P11509 494 aaPredicted RBP5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 MYCLP1P12525 358 aaPredicted RBP5.29□□□□□ -1.56
SDR42E1-201ENST00000328945 IL4RP24394 825 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms