RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CLEC4FQ8N1N0 589 aa19.52■□□□□ 0.71
SOX2-201ENST00000325404 ZNF548Q8NEK5 533 aaPredicted RBP19.52■□□□□ 0.71
SOX2-201ENST00000325404 RAB2BQ8WUD1 216 aa19.52■□□□□ 0.71
SOX2-201ENST00000325404 OSBPL10Q9BXB5 764 aa19.52■□□□□ 0.71
SOX2-201ENST00000325404 SOX17Q9H6I2 414 aaPredicted RBP19.52■□□□□ 0.71
SOX2-201ENST00000325404 BPIFA1Q9NP55 256 aa19.52■□□□□ 0.71
SOX2-201ENST00000325404 A0A1W2PPW3 197 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 G3V2T6 193 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 CD160O95971 181 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 ZNF12P17014 697 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 ZNF7P17097 686 aaPredicted RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 CCNA2P20248 432 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 CRHBPP24387 322 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 TOP3AQ13472 1001 aaPredicted RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 ADGRF1Q5T601 910 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 SULT1C3Q6IMI6 304 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.51■□□□□ 0.71
SOX2-201ENST00000325404 ZNF554Q86TJ5 538 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 STK32CQ86UX6 486 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 C17orf80Q9BSJ5 609 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 PIF1Q9H611 641 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 MAGIXQ9H6Y5 334 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 SARS2Q9NP81 518 aaKnown RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 TBX21Q9UL17 535 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 ATP11BQ9Y2G3 1177 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 hCG_2014768A0A024R1R8 64 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 RSL1D1O76021 490 aaKnown RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 NFKBIAP25963 317 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 SHMT2P34897 504 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 DGKQP52824 942 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 ARF5P84085 180 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 NFATC3Q12968 1075 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 RNF219Q5W0B1 726 aaPredicted RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 ITIH5Q86UX2 942 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 RBM4BQ9BQ04 359 aaKnown RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 RBM4Q9BWF3 364 aaKnown RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 FAM126AQ9BYI3 521 aaPredicted RBP19.51■□□□□ 0.71
SOX2-201ENST00000325404 NACA2Q9H009 215 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 LMCD1Q9NZU5 365 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 VAPAQ9P0L0 249 aa19.51■□□□□ 0.71
SOX2-201ENST00000325404 ZNF840PA6NDX5 716 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 GSTA4O15217 222 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 CBFA2T3O75081 653 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 RETP07949 1114 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 POLR2IP36954 125 aaKnown RBP19.5■□□□□ 0.71
SOX2-201ENST00000325404 ALDH7A1P49419 539 aaKnown RBP19.5■□□□□ 0.71
SOX2-201ENST00000325404 PPP2R2BQ00005 443 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 CYP4F3Q08477 520 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 NEDD8Q15843 81 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 FGD3Q5JSP0 725 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 ANKRD26P1Q6NSI1 321 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 CXorf57Q6NSI4 855 aaKnown RBP19.5■□□□□ 0.71
SOX2-201ENST00000325404 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 DCBLD1Q8N8Z6 715 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 BCL7CQ8WUZ0 217 aaPredicted RBP19.5■□□□□ 0.71
SOX2-201ENST00000325404 ACDQ96AP0 544 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 CLPBQ9H078 707 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 FAM118AQ9NWS6 357 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 IRAK4Q9NWZ3 460 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 LHX3Q9UBR4 397 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 TRPS1Q9UHF7 1281 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 GNPTGQ9UJJ9 305 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 BLOC1S6Q9UL45 172 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 V9GYQ6 96 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 TAPBPO15533 448 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 KLKB1P03952 638 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 SLC2A4P14672 509 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 TCF3P15923 654 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 DGKAP23743 735 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 LYPLAL1Q5VWZ2 237 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 XAF1Q6GPH4 301 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 TTC23LQ6PF05 361 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 TAS1R1Q7RTX1 841 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 SLC22A17Q8WUG5 538 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 NTMT1Q9BV86 223 aa19.5■□□□□ 0.71
SOX2-201ENST00000325404 DFNA5O60443 496 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 STC2O76061 302 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 CNPP09543 421 aaKnown RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 SOX11P35716 441 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 ARL1P40616 181 aaPredicted RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 NRIP1P48552 1158 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 MAPKAPK3Q16644 382 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 RUNDC3AQ59EK9 446 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 HABP4Q5JVS0 413 aaKnown RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 CACHD1Q5VU97 1274 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 ATG9BQ674R7 924 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 PTRHD1Q6GMV3 140 aaKnown RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 RBFAQ8N0V3 343 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 ZNF555Q8NEP9 628 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 TOR3AQ9H497 397 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 FANCEQ9HB96 536 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 TMEM39AQ9NV64 488 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 ADGRE2Q9UHX3 823 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 PSME2Q9UL46 239 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 ELOVL7A1L3X0 281 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 IQCF5A8MTL0 148 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 GJB5O95377 273 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 EEF1B2P24534 225 aaKnown RBP19.49■□□□□ 0.71
SOX2-201ENST00000325404 ELK4P28324 431 aa19.49■□□□□ 0.71
SOX2-201ENST00000325404 CORO1AP31146 461 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms