RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SPOCK3Q9BQ16 436 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 LHPPQ9H008 270 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 FOLH1BQ9HBA9 442 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NYNRINQ9P2P1 1898 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 QSER1Q2KHR3 1735 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CCNB2O95067 398 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 BMP2P12643 396 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MATKP42679 507 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CLK3P49761 638 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ARSFP54793 590 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TGM3Q08188 693 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SIGIRRQ6IA17 410 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NKX2-3Q8TAU0 364 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NXPE2Q96DL1 559 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 FCRL4Q96PJ5 515 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 UCK2Q9BZX2 261 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ACTR6Q9GZN1 396 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 GPN2Q9H9Y4 310 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PCDHB16Q9NRJ7 776 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SMOXQ9NWM0 555 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RPS6KB2Q9UBS0 482 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 GTF2A1LQ9UNN4 478 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ABCA3Q99758 1704 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PKDREJQ9NTG1 2253 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 A0A1W2PP18 115 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 OR2AT4A6NND4 320 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 STX16-NPEPL1H3BU86 382 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 STX16O14662 325 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 FFAR3O14843 346 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 GPR42O15529 346 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NPM3O75607 178 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 FGFR1P11362 822 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 UNGP13051 313 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SLC26A2P50443 739 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 FADDQ13158 208 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SLC25A52Q3SY17 297 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CDC42EP5Q6NZY7 148 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 UBE2J2Q8N2K1 259 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MAFIPQ8WZ33 124 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 UBE2E3Q969T4 207 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PFDN5Q99471 154 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 DHRS9Q9BPW9 319 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NUSAP1Q9BXS6 441 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 POLR1EQ9GZS1 481 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CCM2LQ9NUG4 571 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 KCNN3Q9UGI6 736 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NPEPPSL1A6NEC2 478 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CETPP11597 493 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TSPAN8P19075 237 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ERVK-8P63133 956 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF234Q14588 700 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CRTC2Q53ET0 693 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 KANK2Q63ZY3 851 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CAND1Q86VP6 1230 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 WNT8BQ93098 351 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MTFMTQ96DP5 389 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MEAF6Q9HAF1 191 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SIX2Q9NPC8 291 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MTMR10Q9NXD2 777 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RAMP2O60895 175 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 GM2AP17900 193 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SLC5A2P31639 672 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 KIR3DL1P43629 444 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TSPAN5P62079 268 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 DLG2Q15700 870 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PTPRNQ16849 979 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 C11orf96Q7Z7L8 435 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 AMIGO1Q86WK6 493 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ABHD11Q8NFV4 315 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 UTP4Q969X6 686 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 S100PBPQ96BU1 408 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF668Q96K58 619 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 LRTM1Q9HBL6 345 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PPIEQ9UNP9 301 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RPL36Q9Y3U8 105 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 AP3D1O14617 1153 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PROM1O43490 865 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.34e-7■■□□□ 13.9
SMC1A-201ENST00000322213 OMPP47874 163 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 MBTD1Q05BQ5 628 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ZACNQ401N2 412 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PITRM1Q5JRX3 1037 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PGBD2Q6P3X8 592 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 PAOXQ6QHF9 649 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 CHERPQ8IWX8 916 aaKnown RBP6.95□□□□□ -1.3
SMC1A-201ENST00000322213 NLGN1Q8N2Q7 840 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RHBDF1Q96CC6 855 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 AP2M1Q96CW1 435 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 SNX18Q96RF0 628 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 ASB7Q9H672 318 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 XPNPEP1Q9NQW7 623 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 HPF1Q9NWY4 346 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 TNS2Q63HR2 1409 aa6.95□□□□□ -1.3
SMC1A-201ENST00000322213 RFPL1O75677 317 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 FGF1P05230 155 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ACSM2AQ08AH3 577 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SNTA1Q13424 505 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 AGAP7PQ5VUJ5 663 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ACSM2BQ68CK6 577 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms