RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZDHHC4Q9NPG8 344 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 SUCOQ9UBS9 1254 aaKnown RBP15.02□□□□□ -0.01
VARS2-201ENST00000321897 OGDHLQ9ULD0 1010 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 PCDHGA4Q9Y5G9 962 aa15.02□□□□□ -0.01
VARS2-201ENST00000321897 COL2A1P02458 1487 aaPredicted RBP15.01□□□□□ -0.01
VARS2-201ENST00000321897 MYCLP1P12525 358 aaPredicted RBP15.01□□□□□ -0.01
VARS2-201ENST00000321897 KIAA0408Q6ZU52 694 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 MRPL17Q9NRX2 175 aaKnown RBP15.01□□□□□ -0.01
VARS2-201ENST00000321897 RIMS3Q9UJD0 308 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 SPATA2Q9UM82 520 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 TLR6Q9Y2C9 796 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 SLC38A8A6NNN8 435 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 hCG_2039718K7EN88 272 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 PABPC1LQ4VXU2 614 aaKnown RBP15.01□□□□□ -0.01
VARS2-201ENST00000321897 XKR6Q5GH73 641 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 MBOAT1Q6ZNC8 495 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 MZB1Q8WU39 189 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 UROC1Q96N76 676 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 MAGEE1Q9HCI5 957 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 GJD2Q9UKL4 321 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 PCDHB8Q9UN66 801 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 SAP18O00422 153 aaKnown RBP15.01□□□□□ -0.01
VARS2-201ENST00000321897 KPNA5O15131 536 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 TMCC2O75069 709 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 CLDN11O75508 207 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 CLDN7O95471 211 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 GSTM1P09488 218 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 FOXA1P55317 472 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 MXD1Q05195 221 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 LDLRAD1Q5T700 205 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 UBE2R2Q712K3 238 aaPredicted RBP15.01□□□□□ -0.01
VARS2-201ENST00000321897 ZNF614Q8N883 585 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 KCNS3Q9BQ31 491 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 SMOC2Q9H3U7 446 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 RMND5AQ9H871 391 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 MIEF1Q9NQG6 463 aa15.01□□□□□ -0.01
VARS2-201ENST00000321897 RFXANKO14593 260 aa15□□□□□ -0.01
VARS2-201ENST00000321897 IMPDH1P20839 514 aa15□□□□□ -0.01
VARS2-201ENST00000321897 SLC11A1P49279 550 aa15□□□□□ -0.01
VARS2-201ENST00000321897 IL10RBQ08334 325 aa15□□□□□ -0.01
VARS2-201ENST00000321897 PKDCCQ504Y2 493 aa15□□□□□ -0.01
VARS2-201ENST00000321897 ZNF57Q68EA5 555 aaPredicted RBP15□□□□□ -0.01
VARS2-201ENST00000321897 ADAMTSL2Q86TH1 951 aa15□□□□□ -0.01
VARS2-201ENST00000321897 IGFN1Q86VF2 1251 aa15□□□□□ -0.01
VARS2-201ENST00000321897 C19orf18Q8NEA5 215 aa15□□□□□ -0.01
VARS2-201ENST00000321897 TRPV3Q8NET8 790 aa15□□□□□ -0.01
VARS2-201ENST00000321897 SLC47A1Q96FL8 570 aa15□□□□□ -0.01
VARS2-201ENST00000321897 ZIC5Q96T25 663 aa15□□□□□ -0.01
VARS2-201ENST00000321897 WRAP53Q9BUR4 548 aaKnown RBP15□□□□□ -0.01
VARS2-201ENST00000321897 CARD8Q9Y2G2 431 aa15□□□□□ -0.01
VARS2-201ENST00000321897 LTBP3Q9NS15 1303 aa15□□□□□ -0.01
VARS2-201ENST00000321897 PIPSLA2A3N6 862 aa15□□□□□ -0.01
VARS2-201ENST00000321897 CCL16O15467 120 aa15□□□□□ -0.01
VARS2-201ENST00000321897 GBAP04062 536 aa15□□□□□ -0.01
VARS2-201ENST00000321897 OR56A5P0C7T3 313 aa15□□□□□ -0.01
VARS2-201ENST00000321897 POU2F1P14859 743 aa15□□□□□ -0.01
VARS2-201ENST00000321897 CSKP41240 450 aa15□□□□□ -0.01
VARS2-201ENST00000321897 POLD2P49005 469 aa15□□□□□ -0.01
VARS2-201ENST00000321897 YBEYP58557 167 aaPredicted RBP15□□□□□ -0.01
VARS2-201ENST00000321897 ATP6V0D1P61421 351 aa15□□□□□ -0.01
VARS2-201ENST00000321897 HERVK_113P63132 956 aa15□□□□□ -0.01
VARS2-201ENST00000321897 FPGSQ05932 587 aa15□□□□□ -0.01
VARS2-201ENST00000321897 PTGR1Q14914 329 aa15□□□□□ -0.01
VARS2-201ENST00000321897 NDUFA5Q16718 116 aa15□□□□□ -0.01
VARS2-201ENST00000321897 PGM2L1Q6PCE3 622 aa15□□□□□ -0.01
VARS2-201ENST00000321897 LRRC49Q8IUZ0 686 aa15□□□□□ -0.01
VARS2-201ENST00000321897 CENPIQ92674 756 aaPredicted RBP15□□□□□ -0.01
VARS2-201ENST00000321897 TRMOQ9BU70 441 aa15□□□□□ -0.01
VARS2-201ENST00000321897 ERVK-6Q9BXR3 956 aa15□□□□□ -0.01
VARS2-201ENST00000321897 RPF2Q9H7B2 306 aaKnown RBP15□□□□□ -0.01
VARS2-201ENST00000321897 BRWD1Q9NSI6 2320 aa15□□□□□ -0.01
VARS2-201ENST00000321897 MCM3APO60318 1980 aa15□□□□□ -0.01
VARS2-201ENST00000321897 A0A1W2PRU2 124 aa15□□□□□ -0.01
VARS2-201ENST00000321897 AIREO43918 545 aa15□□□□□ -0.01
VARS2-201ENST00000321897 FUCA1P04066 466 aa15□□□□□ -0.01
VARS2-201ENST00000321897 GPIP06744 558 aa15□□□□□ -0.01
VARS2-201ENST00000321897 GABRB3P28472 473 aa15□□□□□ -0.01
VARS2-201ENST00000321897 RPIAP49247 311 aa15□□□□□ -0.01
VARS2-201ENST00000321897 SLC16A1P53985 500 aa15□□□□□ -0.01
VARS2-201ENST00000321897 CBX2Q14781 532 aaPredicted RBP15□□□□□ -0.01
VARS2-201ENST00000321897 SMU1Q2TAY7 513 aa15□□□□□ -0.01
VARS2-201ENST00000321897 UAP1L1Q3KQV9 507 aa15□□□□□ -0.01
VARS2-201ENST00000321897 SCD5Q86SK9 330 aa15□□□□□ -0.01
VARS2-201ENST00000321897 MYLIPQ8WY64 445 aa15□□□□□ -0.01
VARS2-201ENST00000321897 ATP13A3Q9H7F0 1226 aa15□□□□□ -0.01
VARS2-201ENST00000321897 CERS4Q9HA82 394 aa15□□□□□ -0.01
VARS2-201ENST00000321897 IKZF3Q9UKT9 509 aa15□□□□□ -0.01
VARS2-201ENST00000321897 OR6C75A6NL08 312 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 OTCP00480 354 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 PRDX3P30048 256 aaKnown RBP14.99□□□□□ -0.01
VARS2-201ENST00000321897 RPL26P61254 145 aaKnown RBP14.99□□□□□ -0.01
VARS2-201ENST00000321897 ZBTB6Q15916 424 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 MAVSQ7Z434 540 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 PHACTR4Q8IZ21 702 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 OR52B6Q8NGF0 335 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 TOP1MTQ969P6 601 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 LRRC58Q96CX6 371 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 RTP4Q96DX8 246 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 MS4A4AQ96JQ5 239 aa14.99□□□□□ -0.01
VARS2-201ENST00000321897 GFM1Q96RP9 751 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms