RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 NXNL1Q96CM4 212 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 ORAI1Q96D31 301 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF396Q96N95 335 aaPredicted RBP3.98□□□□□ -1.77
SMCO3-201ENST00000316048 CRAMP1Q96RY5 1269 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 PCYT2Q99447 389 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 ISCUQ9H1K1 167 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 CNOT10Q9H9A5 744 aaKnown RBP3.98□□□□□ -1.77
SMCO3-201ENST00000316048 NOX4Q9NPH5 578 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 TRNAU1APQ9NX07 287 aaKnown RBP3.98□□□□□ -1.77
SMCO3-201ENST00000316048 AMACRQ9UHK6 382 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 SQORQ9Y6N5 450 aa3.98□□□□□ -1.77
SMCO3-201ENST00000316048 COL24A1Q17RW2 1714 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ZMYM2Q9UBW7 1377 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 SALL1Q9NSC2 1324 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 A0A0B4J293 547 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TMEM8BA6NDV4 472 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 PRKAB2O43741 272 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 JAK2O60674 1132 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TOMM70O94826 608 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CTDNEP1O95476 244 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TRUB2O95900 331 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 PENKP01210 267 aaPredicted RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 OAS2P29728 719 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ALDH1B1P30837 517 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 PRKCIP41743 596 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 GDF5P43026 501 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 NT5C2P49902 561 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 HNRNPKP61978 463 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 RBP5P82980 135 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 MECOMQ03112 1051 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 SHC4Q6S5L8 630 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 C15orf52Q6ZUT6 534 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 IQCHQ86VS3 1027 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 DZIP1Q86YF9 867 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TBC1D10CQ8IV04 446 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ZNF713Q8N859 430 aaPredicted RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ACVR1CQ8NER5 493 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 WDR20Q8TBZ3 569 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TMEM163Q8TC26 289 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 WASF1Q92558 559 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ESR2Q92731 530 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 OTULINQ96BN8 352 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 URB1-AS1Q96HZ7 61 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 C8orf76Q96K31 380 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 GFI1Q99684 422 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CRNKL1Q9BZJ0 848 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 KCNK15Q9H427 330 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 DENND2DQ9H6A0 471 aaPredicted RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 DNAJB9Q9UBS3 223 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TTC7AQ9ULT0 858 aaPredicted RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TCRBV21S2A2A0A5A6 115 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 KANSL1LA0AUZ9 987 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 SYCE3A1L190 88 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 EIF4E1BA6NMX2 242 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ZBTB43O43298 467 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ITM2AO43736 263 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 NDUFS7O75251 213 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CELF2O95319 508 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 LCATP04180 440 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 ATP5BP06576 529 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 VDRP11473 427 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 GP5P40197 560 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 APOBEC1P41238 236 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 MATR3P43243 847 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TRIM29Q14134 588 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 HYAL4Q2M3T9 481 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CCDC183Q5T5S1 534 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 DAB2IPQ5VWQ8 1189 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CST9LP1Q5W188 147 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CCDC186Q7Z3E2 898 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 CACNA2D4Q7Z3S7 1137 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 IQCA1Q86XH1 822 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 MCEMP1Q8IX19 187 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 DSELQ8IZU8 1212 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 PCDH20Q8N6Y1 951 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 FNBP1Q96RU3 617 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 RIOK1Q9BRS2 568 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 UBAC1Q9BSL1 405 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 TASP1Q9H6P5 420 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 OSGIN1Q9UJX0 560 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 SRPRBQ9Y5M8 271 aaKnown RBP3.97□□□□□ -1.77
SMCO3-201ENST00000316048 LAMA4Q16363 1823 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 DOCK2Q92608 1830 aa3.97□□□□□ -1.77
SMCO3-201ENST00000316048 FAM170AA1A519 330 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 H0Y626 953 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 UFL1O94874 794 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 VNN2O95498 520 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 GH2P01242 217 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 CALM1P0DP23 149 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 CALM2P0DP24 149 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 CALM3P0DP25 149 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 PRF1P14222 555 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 FDPSP14324 419 aaKnown RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 CYP11B2P19099 503 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 POLGP54098 1239 aaPredicted RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 DYNLL1P63167 89 aaKnown RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 TNIP1Q15025 636 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms