RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HELZP42694 1942 aaKnown RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 TMEM202A6NGA9 273 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 WASH3PC4AMC7 463 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 TRIM38O00635 465 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 INPP4BO15327 924 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 PEX1O43933 1283 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 RPS3P23396 243 aaKnown RBP eCLIP12.18□□□□□ -0.46
RNF4-201ENST00000314289 IL12AP29459 219 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 SLC6A11P48066 632 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 PAGE3Q5JUK9 113 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 LILRA3Q8N6C8 439 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 MRGPRX3Q96LB0 322 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 PKP2Q99959 881 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 EPB41L1Q9H4G0 881 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 DUS2Q9NX74 493 aaKnown RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 ARL15Q9NXU5 204 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 ZDHHC3Q9NYG2 299 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 C6orf203Q9P0P8 240 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 KLQ9UEF7 1012 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 NDUFAF1Q9Y375 327 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 USP34Q70CQ2 3546 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 A0A0J9YVX5 310 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 KPNA3O00505 521 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 NME4O00746 187 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 XYLBO75191 536 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 BCAS2O75934 225 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 TNFAIP8O95379 198 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 HMOX2P30519 316 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 TRIM25Q14258 630 aaKnown RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 CRY1Q16526 586 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 CPSF6Q16630 551 aaKnown RBP eCLIP12.18□□□□□ -0.46
RNF4-201ENST00000314289 ZXDCQ2QGD7 858 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 GPR33Q49SQ1 333 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 ATP6AP1LQ52LC2 224 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 MACC1Q6ZN28 852 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 FRS2Q8WU20 508 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 STON2Q8WXE9 905 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 SMG7Q92540 1137 aaKnown RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 NXPE3Q969Y0 559 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 TMEM74Q96NL1 305 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 MCCC1Q96RQ3 725 aaPredicted RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 LYSMD1Q96S90 227 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 HEPHQ9BQS7 1158 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 RIOK2Q9BVS4 552 aaKnown RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 C1QTNF3Q9BXJ4 246 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 MRPS26Q9BYN8 205 aaKnown RBP12.18□□□□□ -0.46
RNF4-201ENST00000314289 SARDHQ9UL12 918 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 CROCCQ5TZA2 2017 aa12.18□□□□□ -0.46
RNF4-201ENST00000314289 CARNS1A5YM72 827 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ASPDHA6ND91 283 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 LOC730098B7Z3J9 87 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 H3BSA7 217 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 MAGEB3O15480 346 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 DENRO43583 198 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 AP1G1O43747 822 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 CYP17A1P05093 508 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 G6PDP11413 515 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PSMC3P17980 439 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 CD9P21926 228 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 RPIAP49247 311 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 DGKQP52824 942 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 CDKL1Q00532 357 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ILF2Q12905 390 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 TRAF3Q13114 568 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 MAP7D1Q3KQU3 841 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 XKR7Q5GH72 579 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 C9orf50Q5SZB4 431 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 ISG20Q96AZ6 181 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 RHBDF1Q96CC6 855 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PDLIM5Q96HC4 596 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 ZNF382Q96SR6 550 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ATG10Q9H0Y0 220 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 OPTCQ9UBM4 332 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PTBP2Q9UKA9 531 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 POLR3HQ9Y535 204 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 RNASEH2AO75792 299 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 FAM58BPP0C7Q3 252 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 CDK4P11802 303 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 IDO1P14902 403 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 XPAP23025 273 aaPredicted RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 DGKGP49619 791 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ACADVLP49748 655 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 NEK2P51955 445 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ADGRE1Q14246 886 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PTGR1Q14914 329 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 NRF1Q16656 503 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 CLHC1Q8NHS4 586 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 CPEB1Q9BZB8 566 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 LIN28AQ9H9Z2 209 aaKnown RBP12.17□□□□□ -0.46
RNF4-201ENST00000314289 DMTF1Q9Y222 760 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 OARD1Q9Y530 152 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PLXNB3Q9ULL4 1909 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 ZNF839A8K0R7 811 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 FADS2P1A8MWK0 482 aa12.17□□□□□ -0.46
RNF4-201ENST00000314289 PRRT4C9JH25 899 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms