RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 I3L521 148 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 PDLIM1O00151 329 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 TAS2R39P59534 338 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 SULT2A1Q06520 285 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 CYP1B1Q16678 543 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 OR2L3Q8NG85 312 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 C12orf66Q96MD2 445 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 EBPLQ9BY08 206 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 OR51V1Q9H2C8 321 aa13.49□□□□□ -0.25
CLCN6-201ENST00000312413 ELAC1Q9H777 363 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 EIF2B3Q9NR50 452 aaKnown RBP13.49□□□□□ -0.25
CLCN6-201ENST00000312413 A0A1W2PQH9 124 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 E9PAM4 449 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 S100A2P29034 98 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CRYBB1P53674 252 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PYHIN1Q6K0P9 492 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 POMZP3Q6PJE2 187 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 SPERTQ8NA61 448 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CRELD1Q96HD1 420 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 HIPK3Q9H422 1215 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PLEKHA1Q9HB21 404 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 AMBNQ9NP70 447 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CPNE3O75131 537 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CLPXO76031 633 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ASGR1P07306 291 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 GJB1P08034 283 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 MTHFD1P11586 935 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 AP2S1P53680 142 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PRR5P85299 388 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 DPY19L1Q2PZI1 675 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 TPRG1LQ5T0D9 272 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 KIAA1324Q6UXG2 1013 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF548Q8NEK5 533 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CANT1Q8WVQ1 401 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 AZIN2Q96A70 460 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF510Q9Y2H8 683 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 RIMS1Q86UR5 1692 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 TCAF2A6NFQ2 919 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 MATN3O15232 486 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 MAGEA12P43365 314 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CREMQ03060 361 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 TARDBPQ13148 414 aaKnown RBP eCLIP13.48□□□□□ -0.259e-8■■■■■ 29.1
CLCN6-201ENST00000312413 EFR3AQ14156 821 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 IKBKEQ14164 716 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF460Q14592 562 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PLCZ1Q86YW0 608 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 AIFM2Q9BRQ8 373 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 TRIM64CA6NLI5 447 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 DCLK1O15075 740 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 GOT2P00505 430 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ITGB1P05556 798 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 NT5EP21589 574 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CD83Q01151 205 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 SMARCB1Q12824 385 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 TRMT10BQ6PF06 316 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 SMARCD3Q6STE5 483 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CCDC107Q8WV48 283 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 STON2Q8WXE9 905 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF282Q9UDV7 671 aaPredicted RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 DISP2A7MBM2 1401 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CCL22O00626 93 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 SLC7A4O43246 635 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CDH15P55291 814 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 HEPACAMQ14CZ8 416 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 ZDHHC24Q6UX98 284 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CXCL17Q6UXB2 119 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 RGL4Q8IZJ4 473 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PREBQ9HCU5 417 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
CLCN6-201ENST00000312413 RUVBL1Q9Y265 456 aaKnown RBP13.48□□□□□ -0.25
CLCN6-201ENST00000312413 CNTNAP1P78357 1384 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 J3QRK9 145 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 OR1I1O60431 355 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 APOL3O95236 402 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 LINGO3P0C6S8 592 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 XRCC1P18887 633 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 KCNA5P22460 613 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 L1CAMP32004 1257 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 BRCC3P46736 316 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 HSPB3Q12988 150 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 INO80EQ8NBZ0 244 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 OR10G2Q8NGC3 310 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 OR5T3Q8NGG3 340 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 FBXL8Q96CD0 374 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 MRPS23Q9Y3D9 190 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms