RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SLITRK4Q8IW52 837 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 SLC4A11Q8NBS3 891 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 TNFRSF25Q93038 417 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 RFT1Q96AA3 541 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 FBXL8Q96CD0 374 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 OTUB2Q96DC9 234 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 PRRX2Q99811 253 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 ALG2Q9H553 416 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 ELOVL7A1L3X0 281 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 OR2AT4A6NND4 320 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 FGF10O15520 208 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 NOBOXO60393 691 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 IFNGP01579 166 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 CTSAP10619 480 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 IDH3AP50213 366 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 RPL6Q02878 288 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 PLEKHG4Q58EX7 1191 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 COL13A1Q5TAT6 717 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 SVOPLQ8N434 492 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 MCCC1Q96RQ3 725 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 MND1Q9BWT6 205 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 CST11Q9H112 138 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 WDR6Q9NNW5 1121 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 TAS2R7Q9NYW3 318 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 MKLN1Q9UL63 735 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 MAU2Q9Y6X3 613 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 NEDD8-MDP1E9PL57 170 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 DHX15O43143 795 aaKnown RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 TBL1XO60907 577 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 SP2Q02086 613 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 DOK6Q6PKX4 331 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 AGMOQ6ZNB7 445 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 BBS12Q6ZW61 710 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 GALNTL5Q7Z4T8 443 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 FAM71AQ8IYT1 594 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 OR52J3Q8NH60 311 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 IRGQQ8WZA9 623 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 ALG3Q92685 438 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 TLCD1Q96CP7 247 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 ZNF570Q96NI8 536 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 FAIM2Q9BWQ8 316 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 DUSP16Q9BY84 665 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 COMMD3Q9UBI1 195 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 NKX1-2Q9UD57 310 aaPredicted RBP8.07□□□□□ -1.12
VPS41-202ENST00000310301 OR12D3Q9UGF7 316 aa8.07□□□□□ -1.12
VPS41-202ENST00000310301 CASZ1Q86V15 1759 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 SLC22A1O15245 554 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 MTA2O94776 668 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 SERPINA3P01011 423 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CATP04040 527 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 TTPAP49638 278 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ZNHIT3Q15649 155 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 PTPRNQ16849 979 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ZBED5Q49AG3 693 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 IDNKQ5T6J7 187 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 C16orf59Q7L2K0 433 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 DNAJB7Q7Z6W7 309 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 DENND1CQ8IV53 801 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CCDC28AQ8IWP9 274 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 AKAP1Q92667 903 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS41-202ENST00000310301 PLD4Q96BZ4 506 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 MRPL38Q96DV4 380 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 ZNF354BQ96LW1 612 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ASB8Q9H765 288 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 UPB1Q9UBR1 384 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 SLC38A8A6NNN8 435 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 REM1O75628 298 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 IL1BP01584 269 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 VARSP26640 1264 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 CAP1Q01518 475 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ZNF267Q14586 743 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 ESRP1Q6NXG1 681 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 ZNF366Q8N895 744 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 DENND6BQ8NEG7 585 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 UBE2E3Q969T4 207 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 LINGO1Q96FE5 620 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 TBC1D17Q9HA65 648 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 TREM1Q9NP99 234 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 PLK2Q9NYY3 685 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 PSME2Q9UL46 239 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 MAN2B2Q9Y2E5 1009 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 LRP5O75197 1615 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 KANTRA0A1W2PQU2 76 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 TULP3O75386 442 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 PRAMEF1O95521 474 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ERBB2P04626 1255 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 CD36P16671 472 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 FMO3P31513 532 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 ABL2P42684 1182 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 MAPK9P45984 424 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 DGKGP49619 791 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 MAN2A2P49641 1150 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 LILRA4P59901 499 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 FBXO43Q4G163 708 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 TMEM214Q6NUQ4 689 aaKnown RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 ZNF517Q6ZMY9 492 aaPredicted RBP8.06□□□□□ -1.12
VPS41-202ENST00000310301 USP30Q70CQ3 517 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 LINGO2Q7L985 606 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 IRF2BP2Q7Z5L9 587 aa8.06□□□□□ -1.12
VPS41-202ENST00000310301 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms